Bison bison bison (American bison): 104989529
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Entry
104989529 CDS
T08726
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04136
Autophagy - other
bbis04140
Autophagy - animal
bbis04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104989529 (ATG16L1)
04136 Autophagy - other
104989529 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104989529 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbis04131
]
104989529 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
bbis03029
]
104989529 (ATG16L1)
Membrane trafficking [BR:
bbis04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
104989529 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
104989529 (ATG16L1)
Mitochondrial biogenesis [BR:
bbis03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104989529 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
ATG16
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_RIG_2nd
eIF2A
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_HPS5
Ge1_WD40
Beta-prop_NWD2_C
DUF2332
CCDC93_CC
Fez1
APEH_N
Vma22_CCDC115
HTH_6
PALB2_WD40
Phage_GPO
HEF_HK
Leu_zip
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
104989529
NCBI-ProteinID:
XP_010839535
Ensembl:
ENSBBBG00000000623
UniProt:
A0A6P3HLZ9
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQKDKEMQMNEAKIAEYLQTISDLETE
CQELRTKLQDLERANQTLKDEYDALQITFTALEEKLRKTSEENQELVTRWMAEKAQEANR
LNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDIEVLVDETSEHPEETSPVRAISRAA
TKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDPHPGAGKEVRVPTTAMSVFDAHDGE
VNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAA
SNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIK
TVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELL
SCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVL
SGKVEKVLSKHHSSSINAVAWSPAGSHVVTVDKGSKAVLWSEY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgagaattaaacaccaagaagagctgactgaactgcacaagaaacgtggg
gagttagcccagttggtgattgacctgaataaccaaatgcagcagaaggacaaggagatg
cagatgaacgaagccaaaattgcagaatacctgcagaccatctctgacctggagaccgag
tgccaggagctacgcactaagcttcaggaccttgaaagagccaaccagaccctgaaggat
gaatatgacgccctgcagatcactttcaccgccctcgaggagaagctgcggaaaacttcc
gaggagaaccaggagttggtcacccggtggatggccgagaaagcccaggaggccaaccgc
ctaaacgcggagaatgaaaaggactcaaggaggcggcaagcccggctgcagaaggagctc
gcagaagcagcgaaggagcctctgccagttgagcaggatgatgatattgaagtcctcgtg
gatgaaacctctgagcaccctgaggagacctctcccgtgcgagccatcagcagagcggcc
actaagcgactctcgcagcctgctggaggccttctggattctatcactaatatctttggg
aggcgctctgtctcttcctttccagttccccaggataacgtggatcctcatcccggtgct
ggtaaagaagtgcgagtgccgacgactgcaatgtctgtctttgacgcgcatgacggggag
gtcaacgctgtgcagttcagcccaggttcccggctcctggccacgggaggcatggatcgg
agggtgaagctctgggaagtgtttggagacaaatgtgagttcaagggctccctgtctggc
agtaatgcaggaattacaagcattgaatttgatagtgctggatcttacctcttagcagct
tcaaatgattttgcaagccgcatctggaccgtggatgactaccggttacggcacacgctc
acgggacacagtggcaaagtgctgtctgccaagttcctgctggacaacgcgcgcatcgtt
tctggaagtcacgaccggaccctcaaactctgggatctacgcagcaaagtctgcataaag
acggtatttgcgggatccagctgcaatgacattgtctgcacagagcagtgtgtgatgagc
gggcattttgacaagaaaattcgtttctgggacatccgatcagagagtattgtccgagag
atggagctcttgggaaagatcactgccctggacttaaatccagaaagaactgaactcctc
agctgctctcgagatgacctgctgaaaattatagacctacgaataaatgctgtcagacag
acattcagcgcgccaggcttcaagtgcggctccgactggacgagagctgtgttcagccct
gacggcagttatgtagcagcgggcgcggccgagggctcgctgtacatctggaacgtgctg
tctgggaaagtggagaaggtcctctcaaagcatcacagctcgtccatcaacgcggtggcc
tggtcccccgccggctcccacgtggtcactgtggacaaaggaagtaaggctgtgctgtgg
tcggagtattga
DBGET
integrated database retrieval system
