KEGG   Bison bison bison (American bison): 104990347
Entry
104990347         CDS       T08726                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
bbis  Bison bison bison (American bison)
Pathway
bbis03420  Nucleotide excision repair
bbis04115  p53 signaling pathway
bbis04120  Ubiquitin mediated proteolysis
bbis05161  Hepatitis B
bbis05169  Epstein-Barr virus infection
bbis05200  Pathways in cancer
bbis05202  Transcriptional misregulation in cancer
bbis05210  Colorectal cancer
bbis05212  Pancreatic cancer
bbis05213  Endometrial cancer
bbis05214  Glioma
bbis05216  Thyroid cancer
bbis05217  Basal cell carcinoma
bbis05218  Melanoma
bbis05220  Chronic myeloid leukemia
bbis05222  Small cell lung cancer
bbis05223  Non-small cell lung cancer
bbis05224  Breast cancer
bbis05225  Hepatocellular carcinoma
bbis05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:bbis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104990347 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104990347 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    104990347 (DDB2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    104990347 (DDB2)
   05202 Transcriptional misregulation in cancer
    104990347 (DDB2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    104990347 (DDB2)
   05212 Pancreatic cancer
    104990347 (DDB2)
   05225 Hepatocellular carcinoma
    104990347 (DDB2)
   05226 Gastric cancer
    104990347 (DDB2)
   05214 Glioma
    104990347 (DDB2)
   05216 Thyroid cancer
    104990347 (DDB2)
   05220 Chronic myeloid leukemia
    104990347 (DDB2)
   05217 Basal cell carcinoma
    104990347 (DDB2)
   05218 Melanoma
    104990347 (DDB2)
   05213 Endometrial cancer
    104990347 (DDB2)
   05224 Breast cancer
    104990347 (DDB2)
   05222 Small cell lung cancer
    104990347 (DDB2)
   05223 Non-small cell lung cancer
    104990347 (DDB2)
  09172 Infectious disease: viral
   05161 Hepatitis B
    104990347 (DDB2)
   05169 Epstein-Barr virus infection
    104990347 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bbis04121]
    104990347 (DDB2)
   03400 DNA repair and recombination proteins [BR:bbis03400]
    104990347 (DDB2)
Ubiquitin system [BR:bbis04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     104990347 (DDB2)
DNA repair and recombination proteins [BR:bbis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104990347 (DDB2)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd EIF3I WD40_RFWD3 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 104990347
NCBI-ProteinID: XP_010840672
Ensembl: ENSBBBG00000007213
UniProt: A0A6P3HMM8
LinkDB
Position
Unknown
AA seq 443 aa
MAPRKRPENQKTPEVVVRPKSKRNRSPRELEPEAKKLCVKGPGSSRRFDSGLWAGLASLR
VPPLCSSIVRALHQHKLGTAAWPSLQQGLQQSFLNSLASYRIFQKAAPFDRRATSLAWHP
THPSTLAVGSKGGDILLWNFGIKDKPTFIKGIGAGGSITGMKFNPLNTNQFFTSSMEGTT
RLQDFKGNTLRVFASSDTCNVWFCSLDVSVKSRVVVTGDNVGHVILLNMDGRELWNLRMH
KKKVTHVALNPCCDWLLATASVDQTVKIWDLRQVRGKSSFLHSLPHRHPVNAAHFSPDGA
QLLTTDQKSEIRVYSACQWDCPPSLIPHPHRHFQHLTPIKASWHPRYNLIVVGRYPDPNF
KSCSPHELRTIDVFDGSSGKIMYQLYDPESSGIMSVRPGPSNNKWEEAGIQPHGSKMTNY
SSHALLLLPPLPPHAHPLVSAAQ
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggctcccaggaaacgcccagaaaaccagaagacccctgaggtggttgtgcgccccaag
agcaagaggaacagaagcccccgggagctggagcccgaggccaagaagctctgtgtgaag
ggccccggttctagcagaagatttgactcaggcctttgggcggggttggctagcctgcgg
gtcccgccgctatgcagcagcatcgtcagggccctccaccagcataagctgggcacagct
gcctggccatcactacagcagggtctccagcagtcttttttgaactctctggcttcttac
cggatattccaaaaggctgccccttttgacaggagggccacatccctggcgtggcaccca
actcaccccagcaccctggctgtgggctccaaagggggagatatcttgctctggaacttt
ggcataaaggacaaacctaccttcattaaagggattggagctggagggagcatcactggg
atgaagtttaaccctctcaataccaaccagtttttcacctcctcaatggagggaacgact
aggctgcaagattttaaaggcaacactctccgagtttttgccagctcagacacctgcaac
gtctggttctgcagcttggacgtatctgtcaaaagccgagtggtggtcacgggagacaat
gtggggcacgtgatcctgctgaacatggatggcagggagctttggaatctgagaatgcac
aaaaagaaggtgacccatgtggccctgaacccgtgctgtgactggctcctggccacagcc
tccgtagatcaaacggtgaaaatctgggacctgcgccaggttagagggaaatccagcttc
ctccactcgctgccgcacaggcatcctgtcaacgcagctcacttcagtcccgatggagcc
cagctcctgactactgaccagaaaagtgagatccgggtttactctgcttgccagtgggac
tgcccgccaagcctgatcccacatcctcaccgccacttccagcacctgacacccatcaag
gcaagctggcatcctcggtacaacctcattgtcgtgggccgatacccagatcctaatttc
aaaagttgttccccccatgaattaaggacgatcgatgtgtttgatggaagctcaggaaag
atcatgtatcagctgtatgacccagaatcttctggtatcatgtcggtgaggcctgggccc
tcaaataataaatgggaggaggcagggattcaacctcatggatcaaaaatgaccaattac
tcctcacatgcccttcttctgctacctccactccctcctcatgctcatccccttgtctct
gcagctcaatga

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