Bison bison bison (American bison): 104990943
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Entry
104990943 CDS
T08726
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
bbis
Bison bison bison (American bison)
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbis01002
]
104990943
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbis04121
]
104990943
Enzymes [BR:
bbis01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104990943
Peptidases and inhibitors [BR:
bbis01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104990943
Ubiquitin system [BR:
bbis04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104990943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
104990943
NCBI-ProteinID:
XP_010841584
UniProt:
A0A6P3HQW7
LinkDB
All DBs
Position
Unknown
AA seq
1489 aa
AA seq
DB search
MFYFRLCLFFFLTDSTTIEKLRAICLDHAKLGDSSLSPSLDSLFFGPSASQVLYLTEVVY
ALLMPAGALLADDSSDFQFHFLKSGGLPLVLSMLTRNNFLPNADMETRRGAYLNALKLAK
LLLTAIGYGHVRAVAEACQPGVEGVNPMASVIQTFKKSFYNXXXECMLRNVSIRLAQQIS
DEASRYMPDICVIRAIQKIIWASGCGALQLVFSPNEEITKIYEKTNAGNEPDLEDEQVCC
EAMEVMTLCFALIPTALDTLSKEKAWQTFIIDLLLHCHSKTVRQVAQEQFFLMCTRCCMG
HRPLLFFITLLFTVLGSTARERAKHSGDYFTLLRHLLNYAYNSNINIPNAEVLLNNEIDW
LKRIRDDVKRTGETGIEETILEGHLGVTKELLAFQTPEKKYHIGCEKGGANLIKELIDDF
IFPASNVYLQYMRNGELPAEQAIPVCGSPATINAGFELLVALAVGCVRNLKQIVDSLTEM
YYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGIL
AIEGTGSDVDDDLSGDEKQDNEVNFIYRGEKPECALSVANVLNELRSKISVYMCFLGCIA
FSLKNILYLLFWDCHTLHILLHSFLRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGH
PAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYVKGDLLEGA
NAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEP
YTVAGVAKLEGDNVNPESQLIQQNEQSDSETAGSTKYRLVGVLVHSGQASGGHYYSYIIQ
RNGGDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWW
NAYILFYERLDTIDQGDELIRYISELAITARPHQIIMPSAIERSVRKQNVQFMHNRMQYS
MEYFQFMKKLLTCNGVYLNPPPGQDHLLPEAEEITMISIQLAARFLFTTGFHTKKIVRGS
ASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFSEYLLECPSAEVRGAFAKLIVFIAHF
SLQDGPCPSPFASPGPSSQAYDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYA
NLGVAEKTQLLKLSVPATFMLVSLDEGPGPPIKYQYAELGKLYSVVSQLIRCCNVSSRMQ
SSINGNPPLPNPFGDPNLSQPIMPIQQNVADILFVRTSYVKKIIEDCSNSEETVKLLRFC
CWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNALKGIPDDR
DGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVAYQILQGNGDLKRKWTWAVEWLGDEL
ERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEVKKATSVQQ
IEMEESKEPDDQDAPDEHESPPPEDAPLYPHSPGSQYQQVSGLVCVFIP
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgttttattttagactatgtctctttttttttcttacagatagcacaacaatagaaaaa
ttaagagctatttgtttagaccatgccaaacttggagacagcagccttagtccatctctt
gactcacttttctttggtccttcagcctcacaagtactatacctaacagaggtagtctat
gccttgttaatgcctgctggtgcacttctggctgatgattcctctgattttcaatttcac
ttcttgaaaagtggtggcctcccccttgtcttgagcatgctaaccagaaataacttctta
ccaaatgcagatatggaaactcgaaggggtgcctacctcaatgctcttaaattagccaag
ctgttgctaactgccattggctatggtcacgttcgagccgtggcagaagcttgtcagccg
ggtgtggaaggcgtgaatccgatggcatcggtaatacagacttttaaaaaatctttttat
aatnnnnnnnntgaatgcatgcttagaaatgtgtcaattcgtcttgctcagcaaatatct
gatgaggcttcaagatatatgcctgatatttgtgtaattagagctatccaaaaaatcatc
tgggcatcaggatgtggggcattacagctagtatttagcccaaatgaagaaatcactaaa
atttatgagaagaccaatgcaggcaatgagccagatttggaggatgaacaggtttgctgt
gaagcaatggaagtgatgacattatgttttgccttgattccaacagccttagatactctt
agtaaagaaaaggcttggcagacattcattattgatttactattgcactgtcacagcaaa
actgttcgccaggtggcacaggagcagttctttttaatgtgcaccagatgttgcatggga
cacaggcctctacttttcttcattactctgctcttcaccgttttggggagcacagccaga
gagagagctaaacattcaggcgactactttactcttttaaggcaccttcttaattatgcc
tacaatagtaatattaacatacccaatgcagaagttcttctcaataacgaaattgattgg
cttaagagaatcagggatgatgttaagagaacaggtgaaacgggtattgaagagacgatc
ttggaaggtcatcttggggtaacaaaagaattactggcttttcaaacccctgagaaaaag
tatcatattggttgtgaaaaaggaggtgctaatctcattaaagaattaattgatgatttc
atcttccctgcgtccaatgtttacctgcagtatatgagaaatggagaactgccagccgaa
caggctattccagtctgtggttcaccagctaccattaatgcgggctttgagttacttgta
gcattagctgttggctgtgtgaggaacctcaaacagatagtagattctttgactgaaatg
tactacattggcacagcaataactacttgtgaagcacttaccgagtgggaatatctacca
cctgttggaccccgcccaccaaaaggatttgtcgggctgaaaaacgctggtgctacttgt
tacatgaactctgtgattcagcagctctacatgattccgtccattaggaatggtattctt
gcaattgaaggcacaggtagtgatgtagacgatgatttgtctggggatgagaagcaggac
aatgaggtaaattttatttaccgaggagagaagccagagtgtgctttgtctgtagcaaat
gtcttaaatgaattgaggagtaaaatctcagtttatatgtgttttttaggttgtattgct
ttttccctgaaaaatatattgtatttattgttctgggactgtcacacgttacatatttta
ctccattcatttcttaggctttggggtgagcctgttaatcttcgtgaacaacatgatgct
ttagaattttttaattcattggtggatagtttagatgaagctttgaaagccttaggacat
ccagctatgctaagtaaagtcttaggaggttcctttgcggatcagaagatttgccaaggc
tgcccacatagatacgagtgtgaagaatcttttacgactttgaatgtagacattagaaat
caccaaaatcttcttgattctttggaacaatatgtcaaaggagatttattagaaggtgca
aatgcttatcattgtgaaaaatgcaataaaaaggttgatactgtaaagcgcttgcttatt
aaaaaattgcctcctgttcttgctatccaactaaaacgattcgactatgattgggaaaga
gaatgtgcaatcaagtttaatgattattttgaatttcctcgtgagctggacatggaaccg
tacacagttgcaggtgttgcaaagctggaaggagataatgtaaacccagagagtcagttg
atacaacagaatgagcagtctgacagtgagacagcaggaagcacgaaatacagacttgtg
ggggtgcttgtacacagcggtcaagcaagcggaggacattactattcttacatcattcaa
aggaatggaggagatggtgagagaaaccgttggtataaatttgatgatggagatgtaact
gaatgtaaaatggatgacgatgaagaaatgaaaaaccagtgtttcggtggagagtacatg
ggagaagtattcgatcacatgatgaagcgcatgtcatacaggcgccagaaacggtggtgg
aatgcttatatacttttttatgaacgattggacacaatagaccagggcgatgaattgata
cgatacatatcagagcttgctatcaccgcaagaccccatcagattattatgccatcagcc
attgagagaagtgtacggaaacagaacgtgcaattcatgcataaccgaatgcaatacagt
atggaatattttcagtttatgaaaaaactgcttacatgtaatggtgtttacttaaatcct
cctccagggcaagatcacctgttgcctgaagcagaagaaatcacaatgattagtattcag
cttgccgctaggttcctctttaccacaggatttcacaccaagaaaatagtccgtggctcc
gccagtgattggtatgatgcattatgtattctccttcgtcacagcaagaatgtacgattt
tggtttgctcataatgtcctttttaatgtttcaaatcgcttctctgaataccttctggag
tgccctagtgcagaagtgagaggtgcatttgcaaaactgatagtttttattgcacatttt
tccttgcaagatgggccatgtccatcgccttttgcatctccaggaccttctagtcaggct
tatgacaacttaagcctgagtgatcacttactaagagcagtattaaatctgctgagaaga
gaagtttcagagcatgggcgtcatttacagcagtatttcaacctgttcgtaatgtatgcc
aatttaggtgtggcagagaagacacagcttctgaaattgagtgtacctgctacctttatg
cttgtgtctttagacgaaggtccgggtcctccaatcaagtatcagtatgctgaattaggc
aaattatactcggtagtgtcacagctaatccgctgttgcaatgtctcatcaagaatgcag
tcttcaatcaatggtaaccctcctcttcccaatccttttggtgatcctaatttatcacaa
cctataatgccaattcagcagaacgtggcagacattttatttgtgaggacaagttatgtg
aagaaaatcattgaggactgcagcaactcagaggaaaccgtcaaattgcttcgtttttgc
tgctgggagaatcctcagttctcatctactgtcctcagtgaacttctctggcaggtggca
tattcctacacttatgaactccggccctacttggatctgcttctgcagatcttgctgatt
gaggactcctggcagactcacagaattcacaacgcacttaaaggaatcccagatgaccga
gatgggctgtttgacacaatccagcgctctaagaatcactatcaaaaaagagcataccag
tgtataaaatgtatggtagcgctctttagcaattgtcctgttgcttaccagattctacag
ggcaatggagatcttaaaaggaagtggacctgggcagtggaatggcttggggatgaactt
gaaagacgaccatacactggcaatcctcaatacacttacaacaattggtctcctccagtg
caaagcaatgaaacatcaaatggttatttcttggagagatcacatagtgctaggatgaca
cttgcaaaagcttgtgaactctgtccagaggaggtaaaaaaagccaccagtgtgcagcag
atagaaatggaagaaagcaaagaaccagatgaccaagatgccccagatgagcatgagtca
cctccacctgaagatgccccgttatacccccactcacctggatctcagtatcagcaggta
tcaggtttagtttgtgtttttatcccctag
DBGET
integrated database retrieval system
