Bison bison bison (American bison): 104993575
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Entry
104993575 CDS
T08726
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
bbis
Bison bison bison (American bison)
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbis04131
]
104993575 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbis04147
]
104993575 (COPA)
Membrane trafficking [BR:
bbis04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104993575 (COPA)
Exosome [BR:
bbis04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104993575 (COPA)
Exosomal proteins of bladder cancer cells
104993575 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
104993575
NCBI-ProteinID:
XP_010845189
Ensembl:
ENSBBBG00000020835
UniProt:
A0A6P3I0L4
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPELDIPPGAAG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEVAQQ
TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CKVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaatttgagaccaagagtgcgcgggttaaaggactcagctttcaccccaaa
agaccctggatcctgaccagtttacacaatggagtcatccagttatgggactatcggatg
tgtaccctcattgacaagtttgatgagcatgatggtccagtacgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgactataagattaaggtgtggaattac
aagcttcggcgctgtctcttcacattgcttgggcacttagactacatccgcactacattt
tttcatcatgaatacccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aattggcagtccagaacctgtgtctgtgtgttaacagggcacaatcattacgtcatgtgc
gctcagttccacccttcagaagacctggtcgtgtcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacctgtcccctggtgcagtggagtcggat
gtgagaggaattacgggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctagagggtcatgatcgtggagttaactgggctgcatttcaccctactatgccactcatt
gtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaatcaaaagcatgg
gaagttgatacctgccgaggccattacaacaatgtatcttgtgctgtcttccaccctcgt
caagagttgatcctcagcaattctgaggacaagagtatccgagtctgggacatgtctaag
cgcactggagttcagacattccgcagggaccatgatcgtttctgggtcttagctgcccac
cctaaccttaacctctttgcagcaggccatgatggtggcatgattgtatttaaactggaa
cgagaacggccagcctatgcggttcatggcaatatgctccattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagctgtgatgcagttgcggagtggt
tccaagtttccagtgttcagtatgtcgtacaatccagcagaaaacgcagtcctactgtgt
acaagagccagcaatttagaaaatagtacctatgacttgtataccatccccaaggatgct
gactcccagaatcctgatgctcctgaagggaaacgatcctcaggcctgacagctgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatcta
aagaatgagatcaccaaaaaggtacaggtgcctaactgcgatgagattttttatgctggc
acaggcaacctcctgcttcgagatgcagaatccatcacgctctttgatgtacagcagaag
cggactctggcatctgtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tcccatgtagcactactggccaaacatgccattgtgatctgtaaccgcaaactggaggct
ctatgtaacattcatgagaacattcgtgtcaagagtggggcctgggatgagagtggggta
tttatctataccacaagcaaccacatcaaatatgctgtcaccactggggactacgggatc
atccgaactctggatttacctatctacgtcacgagggtgaagggcaacaatgtatattgc
ctggacagggagtgtcgtcctcgggtgctcaccattgatcccactgagttcaagttcaaa
ctggccctgatcaacagaaaatatgacgaggtgctacacatggtgagaaatgcgaaactt
gtaggccagtctatcattgcttatcttcagaagaagggatatcctgaagtggcactgcat
ttcgtcaaggatgaaaaaactcgctttagtctggcactggagtgtggaaacattgagatt
gctctggaagcagccaaagcactagatgacaagaactgctgggaaaagctgggagaggtg
gccttactacaggggaaccaccagattgtggaaatgtgttatcagcgcaccaaaaacttt
gacaaactttccttcttgtaccttatcactggcaacctagagaaacttcgcaagatgatg
aagattgctgagatacgaaaggacatgagtggccattatcagaatgccctttacctggga
gatgtgtccgagcgggtgcggatcctgaagaactgtgggcagaagtcactggcctatctc
acagctgctacccacggcttagacgaagaagctgagagcctgaaggagacatttgaccca
gagaaggagacaatcccagacattgaccctaatgccaagttgcttcagccacctgcacct
atcatgccgttggataccaactggcccttattgactgtgtccaaagggttctttgagggc
tccattgccagcaaggggaagggaggcgcgctggctgctgacattgacattgacactgtt
ggtactgagggctggggagaggatgctgagctgcagctggatgaagatgggtttgtagag
gctacagaaggtttgggggatgatgctcttggcaagggacaagaagaaggaggtggctgg
gatgtggaagaagatctggagcttcctcctgagctggatataccccctggggcagctggg
ggagctgaggatgggttctttgtgcccccaaccaagggaaccagcccaactcagatctgg
tgtaataactctcagcttccagttgatcacatcctggccggctcttttgaaacagccatg
cgactccttcacgaccaagtaggggtaacccagtttggcccctacaagcaactgttcctg
cagacctatgcccgaggccgcaccacctatcaggctctgccctgcctgccctccatgtat
ggctatcctaatcgcaattggaaggatgcagggctgaagaatggtgtaccagctgtgggc
ctgaagcttaatgacctcatccaacggttgcagctgtgctaccagctcaccacagttggc
aagtttgaggaggctgtggaaaaattccggtccattttactcagcgtgccgcttcttgtt
gtagacaataaacaagagattgcagaggctcagcagcttatcaccatttgccgtgagtac
attgtgggtttgtccatggagacagaaaggaagaaactgcccaaagaaactctagaacag
cagaagcgcatctgtgagatggcagcctatttcacccactcaaacctgcagccagtgcac
atgatcctggtgttgcgtacagccctcaacctcttcttcaagctcaagaacttcaggact
gctgccgcctttgctcggcgcctgttggaactcgggcccaagccggaggtggctcaacag
acccgcaaaatcctgtctgcctgtgagaaaaaccccacagatgcctatcagctcaattat
gacatgcacaaccctttcgacatctgtgctgcatcttatcggcccatctaccgtggaaag
ccagtggagaaatgtccgctcagtggggcctgctattcccctgagtttaagggtcagatc
tgcaaggtcactacggtgacagagattggcaaagacgtgatcggtttgaggatcagccct
ctgcagtttcgctga
DBGET
integrated database retrieval system
