Bison bison bison (American bison): 104993733
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Entry
104993733 CDS
T08726
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03082
ATP-dependent chromatin remodeling
bbis03250
Viral life cycle - HIV-1
bbis04714
Thermogenesis
bbis05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104993733 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104993733 (SMARCB1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
104993733 (SMARCB1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
104993733 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bbis01009
]
104993733 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbis03021
]
104993733 (SMARCB1)
03036 Chromosome and associated proteins [BR:
bbis03036
]
104993733 (SMARCB1)
Protein phosphatases and associated proteins [BR:
bbis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104993733 (SMARCB1)
Transcription machinery [BR:
bbis03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104993733 (SMARCB1)
SWI/SNF complex
104993733 (SMARCB1)
Chromosome and associated proteins [BR:
bbis03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104993733 (SMARCB1)
PBAF complex
104993733 (SMARCB1)
SWI/SNF complex
104993733 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
104993733
NCBI-ProteinID:
XP_010845415
UniProt:
A0A6P3I3G0
LinkDB
All DBs
Position
Unknown
AA seq
337 aa
AA seq
DB search
GPRCAASPGCSCLPPARGLTAAPSLVADHGYTTLATSVTLLKASEVEEILDGNDEKYKAV
SISTEPPTYLREQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDD
HDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNP
LTFVPAIASAIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSP
EKFALKLCSELGLGGEFVTTIAYSIRGQLLCEPSTSLVLHSENPLPTVEIAIRNTGDADQ
WCPLLETLTDAEMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
ggacctcggtgtgctgcgtctcctggctgctcctgcctgccgcccgcccgcgggctgacc
gcagccccgtctctggttgcagatcatggatacacgaccctggccaccagcgtgaccctg
ctgaaagcctccgaggtggaggagatcctggacggcaacgatgagaagtacaaggccgtg
tccatcagcaccgagccccccacctacctcagggaacagaaggccaagaggaacagccag
tgggtgcccaccctgcccaacagctcgcaccacctggacgccgtgccctgctccaccacc
atcaacaggaaccgcatgggccgcgacaagaagcggaccttcccgctctgcttcgacgac
cacgacccagccgtgatccacgagaacgcgtcccagcccgaggtgctggtccccatccga
ctggacatggagattgacgggcagaagctgcgggatgcctttacctggaacatgaatgag
aagctgatgaccccggagatgttctcagagattctctgtgacgacctggatctgaaccca
ctgacgttcgtgccagccattgcctctgccatcagacagcagatcgagtcctaccccacg
gacagcatcctggaagaccagtcagaccagcgcgtcattatcaagctgaacatccacgtg
gggaacatctccttggtggaccagttcgagtgggacatgtcggagaaggagaactcgccc
gagaagttcgctctgaagctgtgctccgagctggggctgggcggggagttcgtcaccacc
atcgcctacagcatccgggggcagctgctctgtgagccgtctacctctctcgtcctccac
agtgagaaccccctgcccacggtggagattgccatccggaacacaggcgacgctgaccag
tggtgcccgctgctggagaccctgacggatgcagagatggagaagaagatccgggaccag
gaccggaacacaaggcggatgaggcgtctggccaacacggccccggcctggtga
DBGET
integrated database retrieval system
