Bison bison bison (American bison): 104994309
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Entry
104994309 CDS
T08726
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X1
KO
K11101
patched 2
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04340
Hedgehog signaling pathway
bbis05200
Pathways in cancer
bbis05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104994309 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
104994309 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
104994309 (PTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
104994309
NCBI-ProteinID:
XP_010846124
Ensembl:
ENSBBBG00000006999
UniProt:
A0A6P3I2X8
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MCVCMCVCVLSIWPVRERVSMSTSVCHVRILSQKTNLCLLQVCIGWEAGNGVKFFPSLGL
CLCTSSLFCIQKPRSQSLAEDGIKRKGKGFMGGCSNAWLTLLFLSQILAGSLKAPLWLRA
YFQGLLFSLGCGIQRHCGKVLFLGLLAFGALALGLRVAIIETDLEQLWVEVGSRVSQELE
YTKEKLGEEAAYTSQMLIQTPRQEGENVLTPEALDLHLQAALTASKVQVSLYGKSWDLNK
ICYKSGVPLIENGMIERMIEKLFPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDP
EQLLAELGPFASLEGFRELLDKAQVGQAYVGRPCLHPDDLHCPPSAPNHHSRQAPNVAQE
LSGGCHGFSHKFMHWQEELLLGGMARDPQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQT
HDIGWSEEQASTVLQAWQRRFVQLAQEALPENASQQIHAFSSTTLDDILHAFSEVSAARV
VGGYLLMLAYACVTMLRWDCAQSQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQV
LPFLALGIGVDDIFLLAHAFTEAPPGSPLQERTGECLRRTGTSVTLTSINNMVAFFMAAL
VPIPALRAFSLQAAIVVGCNFAAVMLVFPAVLSLDLRRRHCRRLDVLCCFSSPCSARVIQ
ILPQELGNGTVPVGVAHLTATVQAFAHCEASSQHVVTILPPQAQLVPPPSDPLGSELFSP
GGSTRDLLGQEEGTGQKAACKSLPCARWNLAHFARSQFAPLLLQSHTKAVVLVLFGALLG
LSLYGATLVQDGLALTDVVPRGTKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFD
LHQRFSSLKAVLPPPATQAPRTWLHYYRSWLQGIQAAFDQDWASGRITRHSYRNGSEDGA
PAYKLLVQTGDAQEPLDFSQLTTKKLVDKEGLIPPELFYMGLTVWVSSDPLGLAASQANF
YPPPPEWLHDKYDTTGENLRIPAAQPLEFAQFPFLLRGLQKTADFVEAIEGARAACAEAS
QAGVHAYPSGSPFLFWEQYLGLRRCFLLAVCILLLCTFLVCALLLLNPWTAALIVLVLAM
MTVELFGIMGFLGIKLSAIPVVILVASIGIGVEFTVHVALVLLCGADNTYTPGPPPWARA
AAGTAVHPGPPTRGGTDVQGERRGPEPPSSAGRRAQVGGTLHPAPELCQSDYLHDCGPPP
TPTAWCLHPPSL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtgtatgtgtgtgtgtgtcctcagcatctggccagtgagagagagggtgtct
atgtcgacctctgtctgtcatgtgcgtatcctatctcagaaaacgaatctatgccttctt
caagtgtgtattgggtgggaggcagggaatggagttaaattttttccaagtttgggcctg
tgtctgtgtacgtcctccctgttttgcatccagaaaccaagaagccagagcttggcagag
gatggaataaagagaaaagggaaaggtttcatgggtggttgcagtaatgcctggctgacc
cttctctttctatcccagatcctagctgggagcctgaaggctccgctctggctccgtgct
tacttccagggcctgctcttctctttgggctgcgggatccagagacactgtggcaaagtg
ctcttcctgggactgttggcctttggggccctagcactgggtctccgcgtggccatcatt
gagacagacctagaacagctctgggtggaagtgggcagccgggtgagccaggaactggaa
tacaccaaggagaagctgggggaggaggctgcgtatacctcccagatgttgatacagacc
ccgcgccaggagggggagaacgtcctcacgcccgaggcacttgacctccacctccaggca
gccctcaccgccagtaaagtgcaagtatccctctatggaaagtcctgggatctgaacaaa
atctgctacaagtcaggagttcccctaattgaaaatggaatgattgagcggatgattgag
aagctgtttccctgcgtgatcctcacccccctcgactgcttctgggagggagccaaactc
caagggggctctgcctacttgccgggccgcccagacatccagtggaccaacctggaccca
gagcagctgctggcggagctgggcccctttgcctcccttgagggcttccgggagctgcta
gacaaggcacaggtgggccaggcctacgtggggcggccctgtctgcaccctgacgacctc
cactgcccacccagtgcccctaaccatcacagcaggcaggctcccaacgtggctcaggag
ttgagtgggggctgccatggcttctcccacaagtttatgcactggcaggaggagctgctg
ctgggaggcatggccagagacccccaaggacagctgctgagggcagaggccctgcagagc
accttcctgctaatgagcccccgccagctctacgagcacttccgaggtgactaccagacg
catgacatcggctggagcgaggagcaggccagcacggtccttcaggcctggcagcgacgc
tttgtgcagctggcccaggaggccctgcccgagaacgcatcccagcagatccacgccttc
tcctctaccaccctggacgacatcctgcacgccttctctgaagtcagcgctgcccgtgtg
gtggggggctacctgctcatgctagcctatgcctgtgtgacaatgctgcggtgggactgt
gcccagtcccagggtgcagtgggcctcgctggtgtgctgctggtggccctggcagtggcc
tcgggcctggggctctgtgccctgttgggcatcgccttcaacgctgccactacccaggtg
ctgcctttcttggcactgggcatcggcgtggacgacatattcctgctggcacacgccttc
acagaggctccacctggcagccctctccaggagcgcacgggggagtgtctgcgacgcaca
ggcaccagtgtcacactcacatccatcaacaatatggttgccttcttcatggccgcccta
gttcccatccctgcactgcgggccttctccttgcaggcagccatagtggtgggctgcaac
tttgcagccgtgatgcttgtcttcccagcggtcctcagcctggacctgcggcggcgccac
tgccggcgcctggatgtgctctgctgcttctctagcccctgctctgctcgggtgattcag
attctgccccaggagctggggaatgggacggtaccagtgggtgttgcccacctgactgcc
acggttcaagcctttgcccactgtgaagccagcagccaacatgtggtcaccatcttgcct
ccccaagcccagctggtgccgccaccttctgaccctttgggctctgagctcttcagccca
ggagggtccacacgggaccttctagggcaggaggaggggacagggcagaaggcagcctgc
aagtccctgccctgtgcccgctggaatcttgcccattttgcccgctctcagtttgcaccc
ttgttgctccagtcccacaccaaggctgtagtactggtactttttggggctctcctgggc
ctgagcctctatggagcgaccttggtgcaggacggtctggccctgactgatgtggtgccg
cgcggcaccaaggagcatgccttcctgagcgcccagctcaggtacttctctctgtatgag
gtggctctggtgacacagggtggctttgactacgcccactcccaacgagccctctttgat
ctgcaccagcgcttcagttccctcaaggctgtgctgcccccaccggccacccaggcaccc
cgcacctggctgcactactaccgcagctggctacagggaatccaggctgcgtttgaccag
gactgggcttctgggcgcatcacccgccactcataccgcaatggctctgaggatggggcc
ccggcatacaagctgctcgtccagaccggggatgcccaggagcctctagatttcagccag
ctgaccaccaagaagctggtggacaaggaagggctgatcccacccgagctcttctacatg
gggctgactgtgtgggtgagcagtgaccccctgggtctggcagcctcacaggccaacttc
tatcccccacctcctgagtggctgcatgacaagtatgacaccacgggggagaatcttcgc
atcccggcggcccagcccttggagtttgcccagttccccttcctcctgcgcggcctccag
aagactgcagacttcgtggaggccattgagggggcccgggcagcgtgtgctgaggccagc
caggccggggtgcatgcctaccccagcggctcccccttcctcttctgggagcagtacctg
ggcctgcggcgctgcttcctgctggcagtctgcatcctgctgctgtgtactttcctcgtc
tgtgccctgctgctgctcaacccctggacggctgcgctcatagtactggtcctggcgatg
atgactgtggagctctttggcatcatgggtttcctgggcatcaagctgagtgccatcccg
gtggtgattcttgtggcctccataggcatcggtgtcgagttcaccgtccacgtggctctg
gtacttctttgtggtgctgacaatacttacactcctgggcctcctccatgggctcgtgct
gctgccggtactgctgtccatcctgggccccccaccagaggtggtacagatgtacaagga
gagcgcagaggtcctgagccccccagctccgcagggaggagggctcaggtggggggtacc
ctccaccctgccccagagctttgccagagtgactacctccatgactgtggccctccaccc
acccccactgcctggtgcctacatccacccagcctctga
DBGET
integrated database retrieval system
