Bison bison bison (American bison): 104994421
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Entry
104994421 CDS
T08726
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04140
Autophagy - animal
bbis04142
Lysosome biogenesis
bbis04145
Phagocytosis
bbis04148
Efferocytosis
bbis05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
104994421 (VPS18)
04142 Lysosome biogenesis
104994421 (VPS18)
04140 Autophagy - animal
104994421 (VPS18)
04148 Efferocytosis
104994421 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104994421 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbis04131
]
104994421 (VPS18)
Membrane trafficking [BR:
bbis04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104994421 (VPS18)
Hops complex
104994421 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_Vps41
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
104994421
NCBI-ProteinID:
XP_010846276
UniProt:
A0A6P3HUN3
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSTVLQPGCPSVGIPHSGYVNAQLEKEAPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHMELGRKDDAKVHKMFLDPTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYMLNEEGGPAPVCSLEAERGPEGRGFVIATTRQRLFQFIGRVAEGAE
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAHTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
KPAERTQATLLTAWLTELYLSRLGALQGDPDALNLYRETRERFRSFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEAQQVSQAXXXMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAQGSPRAKEAEGGTAAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatcttggatgaatacgaggactccctgtcccgctcgaccgtcttgcagccc
ggctgccccagcgtgggcatcccccactcgggatatgtgaatgctcagctagagaaggaa
gcgcccatcttcacgaagcagcgcattgactttaccccttccgagcgcatcaccagtctt
gtcgtctcctgcaatcagctctgcatgagccttggcaaggatacactactccgcattgac
ttgggcaaagcaaatgaacccaaccacatggagctggggcgcaaggatgatgccaaagtt
cacaagatgttcctggaccccactggttctcatctgctgatcgctctgagcagcactgag
gtcctctatgtgaatcgtaatggacagaaggttcggcccctggcacgctggaaggggcag
ctggtggagagtgtgggctggaataaggccctgggcactgagagcagcacgggtcccatc
ctggttggcaccgcccaagggcagatctttgaagcagagctttcggccagcgagggtggg
ctttttggccctgccccggatctctacttccgtccattgtacatgctaaatgaagaaggg
ggcccagcacctgtgtgctcccttgaggctgagcggggccctgaagggcgcggttttgtc
attgccaccactcggcagcgcctcttccagttcataggccgagtggcggagggagctgag
gcccagggtttctcggggctctttgctgcctatgctgaccacccacccccattccgtgag
ttccccagcagtctgggctacagcgagctggccttctacacccccaagttgcgctctgca
ccccgggccttcgcctggatgatgggagatggcgtgttgtatggatcgttggactgcggg
cgtccggactccctgctgagtgaggagcgggtctgggagtacccagagggggtgggtccc
ggggccagcccacccctggccattgtcctgacccagttccacttcctgctgctgctggca
gaccgggtggaggcagtgtgcacgctgacgggacaggtagtgctgcgggaccacttcctg
gagaagtttgggccgctgaagcacatggtgaaggactcctccacgggtcacctgtgggcc
cacaccgagcgggctgtcttccgctaccacgtacagcgggaggcacgggatgtctggcgc
acctacctagacatgaaccgcttcgacctggccaaggagtattgtcgagagcggcctgac
tgcctggacacagtcctggcccgggaggctgacttctgcttccgccagcgtcgctacctg
gagagcgctcgctgctatgccctgactcagagctactttgaagagattgcccttaagttc
ttggaggcccgacaggaggaggcgctggccgagttcctgcagcgaaaactggccagtttg
aagcctgccgaacgaacccaggcaaccctgctgaccgcgtggctgacggagctctacttg
agccggctcggggccctgcagggtgaccccgacgccctgaacctctaccgggaaacccgt
gagcgcttccgctccttcctcagcagccctcgccacaaggagtggctctttgccagccgg
gcctccatccacgagctgttggccagccacggggacacggagcacatggtgtactttgct
gtgatcatgcaggactacgagcgcgtggtggcttaccactgccagcatgaggcctacgag
gaggccttggccgtgctggcccgccaccgtgatccccagctcttctacaagttttcgccc
atccttatccgtcacatccctcgccagctggtggacgcctggattgagatgggcagccgg
ctggatgcccggcagctcatccctgccctggtgaactatagccaaggtggcgaggcccag
caggtgagccaagcnnnnnnnnncatggagttctgcgtgaatgtgctgggcgagaccgag
caggctattcacaattacctgctgtcgctctatgcccggggccagccagcctcactgctg
gcctacctggagcaggccggggccagcccacatcgcgtgcattatgatctcaagtatgcg
ctgcggctctgtgctgaacacggccaccaccgtgcttgtgtccacgtctacaaggtcctg
gagctgtatgaggaggctgtggacctggccctgcaggtggatgtggacctggccaagcag
tgtgctgacctgcctgaggaagacgaggagctgcgcaagaagctgtggctaaagattgcg
cggcacgtggtgcaggaggaggaagatgtacagacggccatggcctgcctggccagctgc
cccctgctcaagattgaagatgtgctgcctttctttcctgacttcgtcaccattgaccac
ttcaaggaggccatctgcagctcactgaaggcctacaaccaccacatccaagagctacag
cgagagatggaagaggccacagccagtgcccagcgcatccggagagacctgcaggagctg
cggggccgctatggcaccgtagagccccaggacaaatgtgccacctgcgactttcccctg
cttaaccgccccttttacctcttcctctgtggccacatgttccatgctgactgcctgctg
caggctgtgcggcctggcctgccggcctacaagcaggcccggctcgaggagctgcagcga
aagctaggggctgctccaccccccgcccaggggtctccccgggctaaggaggctgagggg
ggcactgctgctggggggcccagccgggaacagctcaaggctgacctggatgaacttgtg
gccgctgagtgcgtgtactgtggggagctgatgatccgctctattgaccggcccttcatc
gacccccagcgctacgaggaggagcacctcagttggttgtag
DBGET
integrated database retrieval system
