Bison bison bison (American bison): 104994442
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Entry
104994442 CDS
T08726
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04140
Autophagy - animal
bbis04142
Lysosome biogenesis
bbis04148
Efferocytosis
bbis05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
104994442 (VPS39)
04140 Autophagy - animal
104994442 (VPS39)
04148 Efferocytosis
104994442 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104994442 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbis04131
]
104994442 (VPS39)
Membrane trafficking [BR:
bbis04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
104994442 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
VPS18_solenoid_2nd
LIF1_N
Lgl_C
DUF4145
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
104994442
NCBI-ProteinID:
XP_010846314
Ensembl:
ENSBBBG00000003072
UniProt:
A0A6P3I3E7
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHAETGD
EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGANKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLAIPYLEHVIHVW
EETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKAPVPAGEEEGELGEYRRKLLMFLEIS
SYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHVLKDTRMAEEYCHKHYDQNK
DGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLL
PANTQINDIRIFLEKVLEENAQRKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagccggtgccgattctagaaaagctgcctctgcagatcgactgt
ctggctgcctgggaggaatggctgcttgttggaacaaaacaaggtcatcttcttctctat
aggattcggaaagacgttggttgcaacaggtttgaagtgacattagagaaatccaataag
aacttctccaaaaagattcagcagatccatgtggtctcccagtttaagattctggtcagc
ttgttagaaaataatatttacgtccatgacctgttgacatttcaacaaatcactacggtt
tccaaggcaaagggagcatcattgttcacatgtgaccttcagcacgcagagactggggac
gaggtgttgcggatgtgtgttgccgtgaaaaagaagctgcagctctatttctggaaagac
agggaatttcatgagttgcagggggactttagtgtaccggatgtgcccaagtccatggca
tggtgcgaaaattctatctgtgtgggcttcaagagagactactacctaataagggtggat
ggaaagggggccaacaaagagctcttcccaacaggaaaacagctggaacccttagttgca
cctctggcagatggaaaagtagctgtgggtcaggatgatctcactgtggtgctcaatgag
gaggggatctgcacgcagaagtgtgccctgaactggacagacatcccagtggccatggag
caccagcctccctacatcattgcagtgttgcctcgatatgtggaaatccggacatttgag
ccgaggcttctggtccagagcattgaactgcaaagaccccgtttcattacttcgggcgga
tcaaacattatctatgtggccagtaatcactttgtctggagactcattccagtccccatg
gcgacccaaattcaacagcttctccaggacaagcagtttgaattggctctgcagctcgca
gaaatgaaagatgattccgacagtgaaaagcagcaacagatccatcacatcaagaacttg
tatgccttcaacctcttctgccagaagcgttttgatgagtccatgcaagtctttgctaaa
cttggcacagatcctacccatgtgatgggcctgtacccagacctgctgcccacagactac
aggaagcagctgcagtatcctaacccactgcctgtgctgtctggggctgagctggagaag
gctcacttagctctaattgactacctgacacagaaacgcagccaattggtaaagaagctg
aatgactctgatcaccagtctagcacctcccctctcatggaagggactcctaccatcaaa
tccaagaagaagctgctgcagatcattgacaccaccctgctcaagtgctaccttcatacg
aacgtggccctggtggcccccttgctgcgtctggagaacaatcactgccacatcgaagag
agcgagcacgtgctgaagaaggctcacaagtacagcgagctgatcatcctgtacgagaag
aaggggctccacgagaaagctctgcaggtgctggtggaccagtccaaaaaagcaaattcc
cctctgaaaggccatgagcggacagtgcagtacctgcaacatctgggcacagaaaatctg
catttaattttttcctactcggtgtgggtgctgagagacttcccagaggatggtctgaag
atatttactgaggacctcccagaggtggagtctctgccacgagaccgagtgctgggcttc
ttagtggagaattttaagggtctggctattccgtatctggaacatgtcatccacgtttgg
gaggagactggctctcggttccacaactgcctgatccagttgtactgcgagaaggtgcaa
ggtctgatgaaggagtatctcctgtccttccccgcaggcaaagctccagtccctgctggt
gaggaggaaggagagctgggagaataccgacggaagctccttatgttcctggaaatttcc
agctactatgacccaggccggctcatctgtgattttccttttgatggcctcttggaagaa
cgtgctctcctgctgggacgcatggggaaacatgaacaagctctcttcatctacgtccac
gtcctgaaagacacgaggatggctgaagagtactgccacaagcattatgaccaaaacaaa
gatggcaacaaagatgtgtatctgtccctgctccggatgtacctgtcgccccccagcgtg
cactgcctggggccgatcaagctggaactgctggagccacaagccaacctccaggccgcc
ctgcaggtcctagagctgcaccacagcaagctggacaccaccaaggccatcaacctgctg
cccgcgaacactcagattaacgacatacgcatctttctggaaaaggtcttagaagagaat
gcacagaggaaacggttcaaccaagtgctcaagaaccttctccatgcagagttcctgagg
gtccaggaagagcgcatcctgcaccagcaggtgaagtgcatcatcacagaggagaaggtg
tgcatggtgtgtaagaagaagattgggaacagcgcatttgcaagataccccaatggggtg
gtcgtgcattacttctgctccaaagaggtcaacccggctgacacctga
DBGET
integrated database retrieval system
