Bison bison bison (American bison): 104995992
Help
Entry
104995992 CDS
T08726
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
bbis
Bison bison bison (American bison)
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbis03000
]
104995992 (RC3H1)
04121 Ubiquitin system [BR:
bbis04121
]
104995992 (RC3H1)
Transcription factors [BR:
bbis03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104995992 (RC3H1)
Ubiquitin system [BR:
bbis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104995992 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104995992
NCBI-ProteinID:
XP_010848383
Ensembl:
ENSBBBG00000014592
UniProt:
A0A6P3I9A6
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSTAILPEE
GAVDLPSRKTPALPNGIVSAGNAVTQLIPRGTDPRYESSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISTLPVNPHPVPPRGPTELPPMPVTKPLQMVARGSQLYPAQQADVYYQDPRGAA
PPFESAPYQQGMYYAPPPQCVSRFVRPPPSAPEPGAPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRVYPAQSYAREEIFRESPIPIEIPPAAVPPYVPEPRERYQQMEGYYP
VAAHPTQIRPSYNREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPSAFHQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA
PQGAPTKSINISDYGPYGTHGGWGGSPYSPHQNIPSQGHFSERERISMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREANTLAGQSQPPPPPPPKWPGMI
SSEQLSLELHQVEREIGKRTRELSMENQCSLDVKSKLNTSKQAENGQPEPQNKVPAEDLT
LTFSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTSSSTP
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaagctccacagtggacggatttcctctcctgcccaatttgcactcagact
tttgacgaaacaattagaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaacaaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgaactcctcccagtgaactcagcgttgttgcagctagtgggtgctcaggttcctgag
cagcagcccattactttgtgtagtggggttgaagatacaaaacattatgaggaagccaag
aaatgtgtagaagaattagcactgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaatagtactactcagagtgttctgagtcgcccaatgcagaggaagctagtgacgctg
gtccactgccaactagtggaagaagaaggcaggattcgtgccatgagggcagcccgatct
ttaggtgaacgaacagttacagagctcattctccaacaccagaatcctcagcaactctct
tccaatctttgggcagcagtcagagctagaggctgccagttccttggaccagcaatgcag
gaggaagccctaaagctggttctcctggccttagaagatggttctgctttgtctagaaaa
gtattggttctctttgtggtgcaaagattggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgtccagctcctttatagagcctcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagctctgcgg
cgagaacatgactcccagatagtgcagattgctatggaagcaggcttacgaattgcacca
gaccagtggtcctctttgctgtatggggaccagtctcacaaatctcatatgcagtccatt
attgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaactaacaattgct
ctccagcggactggagatccagcaaacttgaatcgactaagaccccatttggagctatta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctagaaaatggg
ttggttgctgtccgtacagtggtacatgggctggttgattatatccagaatcacagcaaa
aaaggaacagatcaacagcagcctccacagcatagcaaatataaaacatacatgtgtcga
gacatgaagcagagaggaggatgccctcggggggccagctgtacatttgcacactcacag
gaggaactggaaaaatttcgtaaaatgaacaaacgcctggttcctagaagacccctgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcaacagctatccttccggaagaa
ggggcagtggatctgcctagcagaaaaacccctgctctgccgaatgggattgtatcagca
gggaatgcagtaacacaactgattccacgagggacagacccccgctacgaatccagtctg
aaaccaggaaagatcgatcacttgagcagtagtgcccctgggtcccctcctgacttgcta
gaatcagtccctaagagtatttctaccttgcctgttaatccgcatcctgtacctccaaga
ggaccaacagagctgccccctatgcctgtcactaaacctcttcagatggtggcgcgaggt
tctcagctctatccagcacagcaggctgatgtttattaccaggatcctcgaggagccgct
ccgccattcgaatcagcaccttatcagcagggtatgtactatgctccacctccacaatgt
gtgtctcgttttgtccgacctccaccatctgctcctgaacctggtgctccctacttggat
cattatccaccatacctccaagatcgtgtagtaaactcacagtatggcacacagccacaa
cagtaccctcctatgtacccaccacactatgatggccgtcgagtatacccagctcagtct
tatgcaagagaggagattttccgagaaagtcctatacccattgagattccacctgcagca
gtgccaccctatgtaccagaacccagagaaagataccaacaaatggaaggttactatcca
gtggctgcacacccaactcagatcagaccttcatacaacagagagcctccgtacagtcgg
cttccgcctcctccccagccccatcctagtctagatgagttacatcgaagacgaaaggaa
ataatggcacagctagaagaaaggaaggttatctctccacctccttttgcaccttcacca
acattgccttctgccttccatcaagaggaatttttggatgaagacttgaaggtagctggg
aaatacaaaggaaatgattatagccagtattcaccctggtcatgtgacactattggctcc
tacattggaaccaaagatgcaaaacctaaagatgttgtggcagcagggagtgtggaaatg
atgaatgtggagagtaaaggaatgagagaccagcgattggaccttcagagaagagcagca
gaaaccagtgatgatgatctcatcccatttggagaccgaccaacagtatctcggtttggt
gccatttctcgaacttccaaaacgatctatcagggtgctggcccaatgcaggctatggca
cctcagggagctcccacaaaatctattaacatttcagattatggtccatatggaactcat
ggtggctggggaggttctccatattcacctcatcaaaacataccttctcagggacacttc
agtgagagggagagaatatctatgtcagaagtggctagtcatggaaaaccccttccgtct
gctgagagggaacagctacgactagaattacagcagctaaaccatcaaattagccaacag
acccagctacgtggactagaggctgttagtaacagactggtgttgcagagggaggcgaac
accttggcaggccagtcacagcccccaccaccaccacctccaaaatggcctggaatgatt
tcaagtgagcagttgagcttggaactgcaccaggtggaaagggaaattgggaagagaacc
cgggaactgagtatggagaaccagtgttctctggatgtgaaaagcaaattgaatacaagt
aagcaagcagaaaatggacaaccagaaccacaaaataaggttccagctgaggaccttacg
ttaacattcagtgacgtgcctaatggatcagcattgacacaagagaatatcagcctcctg
tccaacaagaccagctctctgaacctgtcagaggaccctgagggaggaggggacaataat
gactcccagagatcaggagttacatccagttctactccataa
DBGET
integrated database retrieval system
