Bison bison bison (American bison): 104996057
Help
Entry
104996057 CDS
T08726
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
bbis
Bison bison bison (American bison)
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbis04515
]
104996057 (CLSTN1)
Cell adhesion molecules [BR:
bbis04515
]
Cadherins
Cadherin related
104996057 (CLSTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Ig_CLSTN
Cadherin
Laminin_G_3
Laminin_G_2
Nop14
CDC45
FAM176
Glyco_hydro_16
Toxin_R_bind_N
EphA2_TM
Cadherin_C_2
V_ATPase_I
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
104996057
NCBI-ProteinID:
XP_010848492
Ensembl:
ENSBBBG00000021023
UniProt:
A0A6P3I9Q7
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MSFLLLLFLNTVNKHKPWLEPTYHGLVTESDSTVLLDPPLIALDKDAPLRFAESFEVTVT
KEGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSTEKLDCELQKDYTFTIQAYDCGKGPDG
ANVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVVEGKQYDSILRVEAVDADCSPQFSQI
CSYEIVTPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRAAEDVLVKISIKP
TCTPGWQGWNNRVEYEPGTGALTLFPNVHLETCDESVASAQVVVELETSHIGKGCDRDTY
SEKSLHRLCGAASGTAELLPSPGGSWNWTVGLPTDNGHDSDQVFEFNGTQAVRVPDGIVS
VNPKEPFTISVWMRHGPFGKKKETILCSSDKTEMNRHHYSLYVHGCRLVFLLRQDPSEEK
KYKPAEFHWKLSQVCDEEWHHYVLNVEIPSVTLYVDGVPHEPFSVTEDYPLHPSKIETQL
VVGACWQEYSGVESDNETEPVPLASAGGDLRMTQFFRGNLAGLTIRSGKLTDKKVIDCLY
TCKEGLDLHTPEDNGRGVKIQANPSQSTLTLEGEDVGELDKAMQHVSYLNSRQFPTPGIR
RLKITSTVKCFNEATCISIPPVDGYIMVLQPEEPKISLSGIHHFARAASEFESSEGVFLF
PELRIISTITREVEPEGEGDEDPTVQESLVSEEIVHDLDTCEVTVEGEELNGEQESLEVD
AARLQQKGIEMSSSDMGVVFTGVDTMASYEEILHLLRYRNWHTRSLLDRKFKLVCSELNG
RYVSSEFQVEVNVIHTANPMEHASHIAAQPQFVHPEHRSFIDLSGHNLANPHPFAVVPST
ATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTITVNPMETYE
DQHSSEEEEEEEEEESEDGDEEDDITSAESESSEEDEGEHGDPQTANRQQQLEGGSMMYK
VILASRSADPPHRQSLPCLVCRPGELSQAPVFLMWLENQHALNLTGVRAIPLTFTQSYRG
RLWELPRTQSMESTQVEVVSRRGRPVWTARRGHMYSAVGAWGGGSPQAGERSLGWLQIHQ
LEDLRL
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttctcctccttctctttttaaacacagtcaacaagcacaagccgtggctggag
cccacatatcatggcttagttacggagagcgacagcaccgtgctcctcgaccccccactc
atcgccctggacaaagatgctcctttgcgctttgcagagagttttgaggtgacagtcacc
aaagaaggtgagatttgtggatttaagattcatggacagaatgtgccctttgacgcagtg
gtggtggataaatccactggcgagggggtcattcgttccacagagaagctggactgtgag
ctgcagaaggattacacgttcaccatccaggcctatgactgcgggaaggggccagacggg
gccaatgtgaaaaaatctcacaaagcaactgtccacattcaggtgaacgacgtcaacgaa
tatgcgcccgtgttcaaggagaagtcctacaaagccacagtggtggaggggaagcagtac
gacagcatcttgagggtggaggcggtggacgcggactgctccccccagttcagccaaatc
tgcagctatgagatcgtcaccccagatgtgccattcaccgttgacaaagatggttacatt
aaaaacacagagaagctgaactatggtaaagagcaccagtacaagctgactgtcacggcc
tacgactgcgggaagaaaagagcagcagaagacgttttggtgaagatcagcatcaagccc
acctgcacccctgggtggcaaggatggaacaacagggtggaatacgagcctggcaccggc
gctctgacactctttccgaatgtccacctggaaacgtgtgacgagtcggtggcctcggca
caggtggtggtggagctggagaccagccacatcgggaagggctgtgaccgtgacacctac
tccgagaagtcacttcatcggctctgcggtgctgcgtctggcacagctgagctgctgcct
tccccaggaggctcctggaactggaccgttggccttcccacggacaacggccatgacagc
gaccaggtctttgagttcaacggcactcaggcggtgagggtcccagacggcatcgtctcc
gtcaatcccaaggagccctttacgatctctgtgtggatgaggcacgggccatttggcaag
aagaaggagacgattctttgcagctcagacaaaacagagatgaaccgacaccattactca
ctctatgtccacggctgccggctggttttcctgctccgtcaggatccttcagaagagaag
aaatacaaacctgcagagttccactggaagctgagtcaggtctgtgacgaggaatggcat
cactacgtcctcaacgtggaaatccccagtgtgaccctctacgtggacggtgtccctcat
gagcccttctctgtcactgaagattacccacttcatccatccaagatcgaaacccagctc
gtggttggggcttgctggcaagagtattcaggagttgaaagtgacaatgaaactgagcct
gtgcctctggcctccgcaggtggagacctgcgcatgacccagtttttccgaggtaatctg
gctggcctgaccatccgttctgggaagctcacagataagaaggtgattgactgtctgtat
acctgcaaagaggggctagacctgcacacccccgaagacaatggcagaggtgtcaagatc
caggccaaccctagtcagtcgacgttgaccttggagggagaggacgtgggggagcttgat
aaggccatgcagcacgtttcctaccttaattcacgacagttccccaccccagggatccga
agactcaaaatcaccagcacggtcaagtgttttaacgaggccacctgcatctccatcccc
ccagtggatggctacataatggttttgcagccagaagagcccaagatcagtctgagcggc
atccaccattttgctcgagcggcttccgaatttgaaagctcggagggggttttcctcttc
cctgagcttcggatcatcagcaccatcacgagagaagtggaacccgaaggggaaggggat
gaggacccgacagttcaagagtcactggtgtcagaggagatcgtgcacgacctggacacc
tgtgaggtcacagtggagggagaagaactgaatggagagcaggagagcctggaggtggac
gcggcccgcctgcagcagaagggcatcgaaatgagcagctctgacatgggcgtggtcttc
acaggtgttgacaccatggccagctatgaggagatcttacacctcctgcgctatcggaac
tggcacaccaggtccttgcttgaccgcaagttcaagcttgtctgctctgagctgaatggt
cgttacgtcagcagcgagttccaggtggaggtgaatgtcatccacacagccaaccccatg
gagcacgccagccacatagctgcccagccgcagtttgtccaccccgagcaccgctccttc
attgacctctcgggtcacaacctggccaacccccacccgtttgcagtcgtgcccagcacg
gccaccgtcgtcatcgtggtgtgtgtcagcttcctggttttcatgatcatcctgggggtg
ttccggatccgggctgcacaccagagaaccatgcgggaccaggacaccgggaaagagaat
gaaatggactgggatgactccgccctgaccatcaccgtgaaccccatggagacatacgag
gatcagcatagcagtgaggaggaagaggaggaggaggaagaggagagtgaggatggggac
gaggaggacgacatcaccagtgctgagtcggagagcagtgaggaggacgagggggagcac
ggtgacccgcagaccgcgaaccggcagcagcagctggagggggggtccatgatgtacaaa
gtcattctggccagtaggtctgcagaccctccccaccgccagtctctgccctgcttggtg
tgtaggcccggtgagctcagtcaagctcccgtctttctaatgtggcttgagaaccagcat
gcactcaacctgacgggggttagggccatccccctcaccttcacccagagctacagaggc
cgcctctgggagctgcccagaactcagtcaatggagagcacgcaggtggaggtggtgagc
aggcgtgggcgccctgtctggaccgccaggcgtggacacatgtacagcgcagtgggagcc
tggggaggaggcagcccccaggcgggagagaggagtcttggctggctccagatccaccag
ctggaagacttgaggttatag
DBGET
integrated database retrieval system
