Bison bison bison (American bison): 104996433
Help
Entry
104996433 CDS
T08726
Symbol
CIITA
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04612
Antigen processing and presentation
bbis05145
Toxoplasmosis
bbis05152
Tuberculosis
bbis05164
Influenza A
bbis05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
104996433 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104996433 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
104996433 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
104996433 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
104996433 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bbis01001
]
104996433 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bbis04054
]
104996433 (CIITA)
Enzymes [BR:
bbis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104996433 (CIITA)
Protein kinases [BR:
bbis01001
]
Serine/threonine kinases: Other
TAF1 family
104996433 (CIITA)
Pattern recognition receptors [BR:
bbis04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104996433 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
104996433
NCBI-ProteinID:
XP_010848989
UniProt:
A0A6P3IAY6
LinkDB
All DBs
Position
Unknown
AA seq
1295 aa
AA seq
DB search
MNHFQTILSQVRMLLSSHRPSQVQALLDNLLAEELLSREYHHALLHESDGEALARKISLT
LLEKGDPDFALLGWIWSGLQAPTAERGPSYKDPGGSGQCPTMELGPLEGSYLELLNSSAD
PLQLYHLYDRMDLTGEEEIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQ
YVFQDTQLEGLSKDIFIEHIGLEEMISESVEVLEEAGQKSQKRPFPEELPVDLKHRKLAE
PLTMPVVTGTCLVGPVSDSLVQPCPPPPALFNTEPASSQTRLKDAGMLGAPRGWASPSPG
GAPGVAMAAGMEFLPLPVSPPRLPQPIWSSGPHPLCAGEYAWEEMHPWEIQLGIPSNPGI
HPPALCFHQLSAEHPLCDSCSAGCQQYHQGQANTAAAVSFKILMENPKSPSLSLVVPPSS
SLLSCLSLPAGPIQIIPTLPTLPQGLWPISGTGTGVSSILIYQSEMPPASQTPPSSGPAV
QSLPKSPDRPGSASPFAPSAADLPSMPEPALTSRAGLTEDEMSPTKCPAAGGASSKLPKW
PESVEQFYQSLRDKYQAQSTGPEGTLVDMDLVRVRLEKSSGKSQERELATLDWAERQPAR
GGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARAVSRAWAHGQLPQYDFVLPNCIL
LILDGFEDLEAHDGSLHSTGGPGSAEPCSLRGLLAGLLQRKLLRGCTLLLTAWPRGRLAQ
SLSKVDALFEVAGFSAQQVETYVRRYFESEGTAEHQERALALLQARPFLLSHSHSPTVCR
TVCQLAEALLQRSDEAQLPSTLTGLYVGLLGPAARDGPPGALAELARLAWELGRAHQRGL
KAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKELPQ
YLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAATTSADRKQKVLTRYLKR
LQPGMLQAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSALEAA
GRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVEEKF
TIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQVFPK
LVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKL
AEALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAG
LRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttccagaccatcctgtctcaggtccggatgttgctctctagccatcggccg
agccaagtgcaggcgcttctggacaacctgctggcggaagagctcctctccagggagtac
caccatgccctgctccatgagtctgatggtgaggctctggccaggaagatctccttgacc
ctgctggagaaaggagatccagacttcgccctcttggggtggatctggagtgggctgcag
gcccccacggcagagaggggccccagctacaaggaccctggtggcagtggacagtgccca
accatggagctggggcctctagaaggcagttacttagaacttctcaacagcagtgctgac
cctttgcagctctaccacctctacgaccggatggatctgacaggagaagaagaaatagag
ctctgctcagagcctgacacagacaccatcaactgcgaacagttcagcaggctgttgtgt
gacatggaaggtgatgaagagaccagggaagcttatgccaatatcgcggaattggaccag
tacgtcttccaggacacccagctggagggcctgagcaaagacattttcatcgagcacata
ggattggaagaaatgatcagcgagagcgtggaggtactggaggaagcagggcagaaaagt
cagaagagacccttcccagaggagctgcctgtggatctgaagcaccggaagctagccgag
cccctcaccatgccggtggtgactggcacttgcctggtggggccagtgagcgactccttg
gttcagccctgcccgccacctcctgctctgttcaacacggagccagcatccagccagacc
cggctgaaggacgcaggtatgttaggggctccaagagggtgggcttccccatcccctgga
ggtgccccaggagtggctatggcagcaggaatggaattcctccctttgccagtgtctccc
ccacgtctgcctcagccaatctggtcctcgggtccccatccactctgtgctggagaatat
gcctgggaggaaatgcatccctgggagatacagctgggaatcccctccaatccgggaatt
cacccaccagccctgtgctttcatcagttatcagctgagcaccctctctgtgacagctgc
tctgctgggtgccagcaataccaccaaggacaggccaacacagctgcagctgtctcgttt
aagattttaatggagaatccaaaatcaccttctctgtctcttgtagtgcctccgtccagt
tccttgttgagctgcctgagtcttcccgcgggacccattcagattatccccactctcccc
actctgccccaggggctctggccgatctcagggactgggacgggggtctccagtatactc
atctaccaaagtgagatgcccccggccagccaaacacccccatccagcgggcctgctgtc
cagagccttcccaagtccccagaccggcctggctctgccagcccctttgccccgtctgcc
gctgacctccccagcatgcccgaaccggccctcacctcccgtgcaggcctgacagaggat
gagatgtcccccaccaaatgcccagcagctggcggggcctccagcaaacttcccaagtgg
cctgagagcgtggagcagttctaccagtcgctacgggacaagtaccaggcccagtccacc
ggcccggaaggcaccctggtggacatggacctggtgagggtgaggctggagaagagcagc
gggaagagccaggagagagagctggccaccctggactgggcagagcggcagccggcccga
gggggtctggccgaggtgctgctggccgccagcgaccgccagcagccccgggagacgcgg
gtgattgctgtgctgggcaaagcgggacatgggaagagtcactgggcccgggccgtgagc
cgcgcctgggcccacggccagctgccacagtacgactttgtcttgcccaactgcatcctg
ctcatcctggatggcttcgaggacctggaagcccacgatggctccctgcacagcacagga
ggccccgggtcggcagagccctgctccctccgggggctgctggcgggcctcctccagcgc
aagctgctgcggggctgcaccctgctgctcacggcctggccccggggccgcctggcccag
agcctgagcaaggtggacgccctgtttgaggtggccggcttctcggcccagcaggttgag
acctatgtgaggcgttactttgagtcggaggggaccgctgagcaccaagagagagccctg
gcgctcctgcaggcccggccgttcctcctgagccacagccacagccccaccgtgtgccgg
accgtgtgccagctcgcggaggccctcctgcagcggagcgatgaagcccagctgccctcc
acgctcacaggcctctacgtgggcctgctaggcccagcagctcgcgatggccccccgggg
gccctggcggaactggccaggctggcctgggagctgggccgtgcgcaccagaggggcctg
aaggcgggctgtttaccgtcggcggaggcgagggcctgggctgtggcccaaggctggttg
cggcccaccccgggggccccggagacggagctggccttctccagcttcctcctgcagtgc
ttcctgggggccgtgtggctggctttgagcggcgaaatcaaggacaaggagctgccgcag
tatctggccttaaccccgaggaagaagcggccctatgacaactggctggagggcgtgccg
cgcttcttggtcggattggtcttccagcctcgcgccggctgcctgggggccctggcaggg
ccggcggccaccacgtcggcggacaggaagcagaaggtgctcacgaggtacctgaagcgt
ctgcagcccgggatgctgcaggcggggcggctgctggagctgctgcactgtgcccacgag
gcgctggaccccgggctctggcagcacgtgctgcaggggctccctgcccgcctctccttc
ctgggcacacggctcacgcctcctgacacccatgtgctgggcagcgccctggaggccgcg
ggccgagacttttccctggacctccgcagcactggcgtcgacgcctctggactggggagc
ctcgtgggactcagctgtgtcacccgtttcagggctgcattgagtgacactgtggagcta
tgggagtccctgcagcagcgtggggaggccaagctactccgggcagtggaggagaagttc
accatcgagcctttcaaggccaagtccatgaaggatgtggaagaccttggcaatctcgtg
cagatccagaggacaagaagctcctctgaagcagcagctggggagctccctgctgtccga
gacttaaagaagctggagtttgcgctgggccctgtcttgggcccacaggtttttcctaaa
ctggtgaagatccttgaggcctttacttcccttcagcatctagacctggactcgctgagc
gagaacaagattggggacgagggtgtcgcccagctctcagccaccttccctcagctgaaa
gccctggagacactcaacttgtcccagaacaacatcaccgacgtgggtgcctgcaagctg
gccgaggctctgcccgcgctggccacgtccctcctcaggctgagcttgtacaataactgt
atctgcgacgcgggagccgagagcctggcgcacgcgcttccagacatggtgtccctccgg
gtgctggacgtccagtacaacaagttcacagccgctggggctcagcagcttgccgctggc
ctgagaaagtgccctcaggtgaagacactggcgatgtggacgcccaccatcccctttggc
gtccaggaacacctgcagcagctggacccacgaatcattctgagatga
DBGET
integrated database retrieval system
