Bison bison bison (American bison): 104996681
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Entry
104996681 CDS
T08726
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104996681 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbis03019
]
104996681 (EDC4)
Messenger RNA biogenesis [BR:
bbis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104996681 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
104996681 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
DUF445
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
104996681
NCBI-ProteinID:
XP_010849313
Ensembl:
ENSBBBG00000015422
UniProt:
A0A6P3I4A3
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAENQRPSNAYNGDLNGLLVPDPLCSGDSA
STNKPGFRAMPPINLQEKQVICLLGDDSSTGIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSPQLACLDEAGNLFVWRLALINGKIQEEILVHIRQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRTNHSTWPVDVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSPVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPSHS
THEDFPFGESRPELGSEGLGSATHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFM
TPSASLQQIAASPSSSSSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKLQ
LDGGLTMSSSSLQASPRGLLPGLLPGPADKLTPKGSGQVPTAASALALELQEVEPLGLPQ
ASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGASAPEGLEPDSMASAASALHLLSP
RPRPGPELGPQLSLDGVPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETCSSL
AESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGNFGTKVPT
PRLPAKDWKTKGSPRASPKLKRKGKKDDGDSSLGSRLTEHQVAETPEDWPALIWQQQREL
AQLRHSQEELLQRLCAQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQE
QLTQQLSQALSSAVAGRLERSVRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVESSM
KENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSF
RLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVGTLQGATEQMAATVSGSVRAEVQ
HQLHVAVGSLQEAILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAASTPVPAAHLDC
QAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSL
IQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSL
GKAARRLSLMLHGLMTPSLP
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcttgcgcgagcatcgacatagaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggccggcgggaggccccagtgcagagaaccaacgaccatctaatgcc
tacaatggagatctcaatgggctcctggtcccagaccccctctgctcaggtgacagtgct
tcaacaaacaagcctggtttccgagccatgccacctattaacctgcaggaaaagcaggtc
atctgcctcttaggagacgacagttccactggcattggaattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcgagcaaggcacgggggagcaacaaggtgaaa
attcagcctgtcgccaagtatgactgggagcagaaatactactatggcaacttgattgct
gtgtccaactctttcttggcctatgctattcgggctgccaacaacggctcagcaatggtg
cgagtgatcagtgtcagcacttcagagcggaccctgctcaaaggcttcacaggcagcgtg
gctgatctggcctttgcacacctcaattccccacagctggcctgcctggatgaggcaggc
aacctgtttgtatggcgcttggccctgattaatggcaaaattcaagaggagatcttggtc
cacatccgccagccagagggcactccgctgaaccacttccgcaggatcatctggtgcccc
ttcatccctgaagagagtgaggactgctgtgaggagggcagcccaacggtggccctgttg
catgaggaccgggctgaggtgtgggacctggacatgctccgcaccaaccacagcacctgg
cctgtggatgtcagccagatcaagcagggcttcatcgtggtaaaaggccacagcacatgc
ttgagtgaaggggccctctcacctgatgggactgtcctggctactgcaagtcatgatggc
ttcgtcaagttctggcagatctacatcgagggacaggatgagccacggtgtttacatgag
tggaagcctcatgacgggcggcccctctcctgcctcctgttctgtgacaaccacaagaaa
caggatcctgaggtccctttctggagattcctcattactggcgctgaccagaatcgggag
ctgaagatgtggtgcacggtgtcctggacctgcctgcagaccattcgcttctccccagat
atcttcagcccagtaagtgtgccccccagcctcaaggtttgcctggacctctcagcagaa
tacctgatcctcagtgatgtacagcggaaggtcctctacgtgatggaactgctgcagaac
caggaggagggccgggcctgcttcagctccatctctgagttccttctcacccaccctgta
ctgagcttcggtatccaggttgtgagtcgctgccggctgcggcacacagaggtgctgcct
gccgaggaggagaatgacagccttggggctgacgggacccatggagcaggtgcaatggag
tctgcagccggtgtgctcatcaagctcttttgtgtgcacactaaggcattacaggacgtc
cagatccgctttcagccacagctgaaccctgacgttgtggccccactcccctcgcactct
acccatgaagactttccatttggagagtctcggccagagctgggctcagagggcctggga
tcagctactcatggctcccagcctgacctccgacgtatcgtggagttgcctgcaccggct
gacttcctcagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatg
acgcctagcgcctccctgcagcagattgctgcatctcccagcagcagcagcagcagcagc
agcagtagcagcagcagcagctcctctctcacagccgtgtctgccatgagcagtacttcg
gccgtggacccctccttgcccaggccacctgaggagctgaccttgagccccaagctacag
ctggatggtggtctgaccatgagcagcagcagcctgcaggcaagcccacgtgggctcctg
cccggcctgctcccaggtccggctgacaaactgactcctaaagggtctggtcaggtgcct
actgctgcctctgcacttgccctggagctgcaggaagtggaacccctggggctgcctcag
gcttcccccagccgcacccgctcccccgatgttatctcctcagcctccactgccttgtcc
caggacatccctgagattgcatctgaggcgctgtcccgtggctttggcgcctctgctcct
gagggcctggagccagacagcatggcctcagcggcctcggcgctccacctgttgtctcca
cggccccggccagggcccgagctcggcccccagcttagcctggatggggtccctggggat
ggggatcggcatagtaccccttccctcctggaggcagccttgacccaggaggccacagcc
cctgacagtcaggtctggcctacagctccagacatcactcgcgagacctgcagcagcctg
gcagagagcccccgaaatggcctccaggaaaagcacaagagcctggccttccaccgacca
ccttatcacctgctgcagcaacacgacagccaggacgccagtgccgagcaaagtgaccat
gatgacgaggtggccagcctcgcctctgctgcagggaactttggcaccaaagtgcccact
ccacgtcttccagccaaggactggaagaccaagggatcccctcgggcctcacccaagctc
aagagaaagggcaaaaaggacgatggggattcatccttgggatcccggctcacagagcac
caggtggcagaaacccctgaggactggccggcactgatctggcagcagcagagagagctg
gcacagctgcggcacagccaagaagagctgctgcagcgcctgtgcgcccagcttgaaggc
ctgcagagcaccgtcacaggccacgtggagcgagccctggagtcaaggcacgagcaggag
cagcggcgactggagcgggccctggccgaggggcagcagcggggtgggcagctgcaggag
cagctgacacagcagctatcccaggcgctgtcttcagcggtggcagggcggctggagcgc
agcgtacgagacgagatcaagaagacggttcctccatgtgtctcccggagtctggagccc
gtggctggccagctcagcaactcggtggccaccaaactcacagctgtggagagtagcatg
aaagagaacatctctaagctgctcaagtccaagaacttgacagatgccattgcccgagca
gccgcagacacattacaggggccaatgcaggccgcctaccgggaagccttccagagtgtg
gtcctgcccgccttcgagaagagctgccaggccatgttccagcagatcaatgacagcttc
cgactgggcacacaggagtacttgcagcagttggagagccacatgaagagccgcaaggca
cgagagcaggaggcacgggagcctgtgctggcccagcttcggggcctggtcggcaccctg
cagggggccacggagcagatggcggccactgtgtctggcagcgttcgggctgaggtgcag
caccagctgcacgtggccgtgggcagcctgcaggaggcgattctagcacaggtacagcgc
atcgtgaagggcgaggtgagtgtggctctcaaggagcagcaggccgccgtcacctctagc
atcatgcaggccatgcgctcagccgccagcacacctgtccctgctgcccacctcgactgc
caagcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggccttc
cagcaggccctgacagctgccgacctgaacctggtgctatacgtgtgtgaaacagtggac
ccaggccaggtttttgggcagccaccttgccccctctcccagcctgtactcctttctctc
atccagcaactggcctctgatcttggcactcgaactgacctcaagctcagctacctggaa
gaggctgtaatgcacctggaccacagtgaccccatcactcgggaccacatgggctccgtc
atggctcaggtgcgccagaagctcttccagttcctgcaggcggagccacacaactcactt
ggcaaagcagcccggcgtctcagcctcatgctgcacggccttatgacccccagcctccct
tag
DBGET
integrated database retrieval system
