Entry |
|
Symbol |
DICER1
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Name |
(RefSeq) endoribonuclease Dicer
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KO |
K11592 | endoribonuclease Dicer [EC:3.1.26.-] |
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Organism |
bbis Bison bison bison (American bison)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:bbis00001]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
104996983 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:bbis03036]
104996983 (DICER1)
Chromosome and associated proteins [BR:bbis03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104996983 (DICER1)
microRNA pathway
RISC loading complex
104996983 (DICER1)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
Unknown
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AA seq |
1922 aa
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVSASWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKHIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEAD
TEPVVDDDDVFPPYVLRPEDGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCRTRELPDG
TFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVK
YEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPRPGQPCYLYVIGMVLTTPL
PDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQ
MLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDIE
KSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFP
SPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRK
AKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVG
VRSLPVDFRYPNLDFGWKKSIDSKSFISIANSSSAENENYCKHSTIVVPENAAHQGANRT
SPLENHDQMSVNCRTLFSESPGKLQIEVSTDLTAINGLSYNKSLANGSYDLANRDFCQGN
HLNYYKQEIPVQPATSYPIQNLYNYENQPKPSDECTLLSNKYLDGNANTSTSDGSPVTAA
VPGTAETGEAPPDRTASEQSPSPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYVVNQDKSNTEKWEKDEMTKDCMLANGKLDDDFEEEEEEEEDLMWRAHKEDADDED
DFLEYDQEHIRFIDNMLMGSGAFVKKISLSPFSATDSAYEWKMPKKSSLGSLPFSSDFED
FDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIA
DCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQQKNLSGS
RAAASGAGYRASVLKDLEYGCLKIPPRCMFDHPDADRTLRHLISGFENFEKKINYRFKNK
AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV
NNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEE
DIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEM
EPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVP
NS |
NT seq |
5769 nt +upstreamnt +downstreamnt
atgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcataatacc
atagtctgtttaaacactggctcagggaagacgtttattgcagtactactcactaaagag
ctgtcttatcagatcaggggagacttcaacagaaatggcaaaaggacggtgttcttggtc
aactctgcaaaccaggttgcccaacaagtgtcagctgtcagaactcactcagatctcaag
gtcggggaatactcaaacctagaagtaagtgcatcttggacaaaagagaaatggaaccaa
gagtttactaaacatcaggttctcgttatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
atcctagaccacccctaccgagaaattatgaagctttgtgaaaattgtccatcatgtcct
cgtattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattggaa
gaaaagattcagaaactggagaaaattcttaagagtaatgctgaaactgcaactgacttg
gtggtcttagacagatatacttctcagccatgtgagattgtggtagactgtggaccattt
actgacagaagtgggctttatgaaagactgctgatggagttagaagaagcacttaatttt
atcaatgactgtaacatatctgtacattcaaaagaaagagattctactttaatttctaaa
cagatactctcagactgccgtgcggtcctggttgtcctgggaccctggtgtgccgataaa
gtagctggaatgatggtcagagagctgcagaaacacatcaaacatgagcaagaggagctg
caccggaagtttctgttgttcacagacactttcctacggaaaatccacgccctgtgtgaa
gagcacttctcccctgcctcgcttgacctgaagtttgtcactcctaaagtaataaagctg
ctcgagatcttacgcaaatacaaaccgtatgagcggcagcagtttgaaagcgtggagtgg
tataataataggaaccaggataattacgtgtcctggagcgattctgaggatgacgaggaa
gatgaagagattgaagagaaagaaaagccagagacaaattttccttctccgtttaccaac
attttgtgtggaattatttttgtggaaagaagatacacagccgtggtcttaaacagattg
ataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttataact
ggacatggcatcggaaagaatcagcctcggaacaaacagatggaagcggaattcagaaaa
caggaagaggtacttaggaaatttcgagcacatgaaaccaacctgcttattgcaacaagt
attgtggaggagggtgttgacataccgaaatgcaacttggtggttcgtttcgatctgccc
acagagtatcgatcctacgttcagtcgaagggaagagcgagggcacccatctctaattat
gtaatgttagcagacacagataaaataaagagttttgaagaagaccttaaaacatacaaa
gctattgaaaagatcttgcgaaacaaatgttccaagtcggttgataccggggaggccgac
acggagcccgtggtggatgacgacgatgttttcccaccgtatgtgctgaggcctgaggat
ggtccccgcgtcacgatcaacacggccattgggcacgtcaacagatactgtgctagatta
ccaagtgatccgtttactcatctggctcctaaatgtagaacccgagagttgcctgatggt
acattttattcaactctttatctgccaattaactcacctcttcgagcctccattgttggt
cccccaatgagctgtattcggttggctgaaagagtcgtggctctcatttgctgtgaaaaa
ctgcacaaaattggcgaactggatgaccatttgatgccagttgggaaggagactgttaaa
tatgaggaagagctggatttacacgatgaagaagagaccagtgttccaggaagaccaggt
tccacaaaacgaagacagtgctacccaaaagcaattccagaatgtttgagggagagctac
cccaggcccggtcagccctgttacctgtacgtgatcggaatggtcctgacgacaccttta
cctgatgagctcaacttcagaaggcggaagctctacccccctgaggacaccacaagatgc
tttggaatactgacagccaagcccatacctcagatcccacactttcctgtgtacacgcgc
tctggagaggtgaccatatctattgagttgaagaagtccggcttcacgttatctctgcag
atgcttgagttgatcacaaggcttcaccagtatatattctcacatattcttcggcttgaa
aaacctgcactagaatttaaacccacagacgcggactcagcctactgcgttctacctctt
aatgttgttaatgactccagcactttggacattgactttaaattcatggaagatatcgag
aaatctgaagctcgcataggcattcccagcacaaagtattcaaaagaaactccctttgtt
ttcaaattagaagattaccaagatgcagttatcattccaagataccgcaattttgatcag
cctcatcgattttatgtcgctgacgtgtacactgatcttacccccctgagtaaatttcct
tcccctgagtatgaaacgtttgcggagtattataaaacaaagtataaccttgacctgacc
aatctcaaccagccgctgctggacgtggaccacacgtcttcacgactcaatcttttgaca
cctcgtcatttgaatcagaaggggaaagctctccctctgagcagtgctgagaagaggaaa
gccaagtgggagagcctgcagaataagcagatactggttccagaactctgtgctatacat
ccaattccagcatcactgtggagaaaagccgtttgtctcccgagcatactttaccgcctt
cactgccttctgactgcagaggagctcagagcccagacggccagcgatgctggtgtggga
gtcaggtcacttcctgtggattttagataccctaacttagacttcgggtggaaaaaatct
atcgacagcaaatctttcatctcaattgctaactcctcttcagctgaaaatgagaattac
tgtaagcacagcacaattgtcgtccctgaaaatgctgcacatcaaggtgctaatagaacc
tcccctctagaaaatcatgaccaaatgtctgtgaactgcagaacgttgttcagcgagtca
cctggtaagctccaaattgaagtttcaacagatctgacagcaattaatggtctttcttac
aataaaagtcttgccaatggcagttacgatttagctaacagagacttttgccaaggaaac
catctgaattactataagcaggaaatacctgtacaaccagctacctcatatcccattcag
aatttatacaattacgagaaccagcccaagcccagcgatgaatgtactctactgagtaat
aaataccttgatggaaatgctaacacatctacctcagatggaagtcccgtgacggctgcc
gtgcctggtactgcagagactggggaggcgcccccggacaggacggcttctgagcagagc
ccttctcctgggtactcctcgaggacgcttggccccaaccctgggctcattcttcaggct
ttgaccctttcgaacgctagtgatggatttaacctggagcggctcgagatgcttggcgac
tccttcctcaagcatgcgatcaccacgtatctcttctgcacttaccctgatgcgcatgag
ggccgcctttcctacatgagaagcaaaaaggtcagcaactgtaatctgtatcggcttgga
aaaaagaaggggctgcccagccgcatggtggtgtccatatttgacccccctgtgaattgg
cttcctcctggttacgtagtaaatcaagacaaaagtaacacagagaaatgggaaaaagat
gaaatgacaaaagactgcatgttggctaatggcaaactggacgatgacttcgaggaggag
gaagaggaggaggaggacctgatgtggagggctcacaaggaggatgcggacgacgaggac
gacttcctggaatacgatcaggagcacatcaggttcatagataacatgctgatggggtca
ggggctttcgtcaagaaaatctctctctctcctttttctgccaccgattctgcatacgag
tggaaaatgcccaaaaagtcctcccttggtagtctgccattctcatccgattttgaggat
ttcgactacagctcctgggatgcgatgtgctatctggatccgagcaaagccgttgaagag
gatgactttgtggtggggttctggaatccatcagaagaaaactgtggtgtggacacaggg
aagcagtccatctcttacgacctgcacaccgagcagtgcattgccgacaaaagcatagcc
gactgtgtggaagccctgctgggctgctatttaaccagctgtggcgagagggctgctcag
cttttcctctgttcgctggggctgaaggtgctcccggtaattaaaaggactgatcgggaa
aaggccatgtgcccgaccagggagaatttcaccagccaacaaaagaacctttcagggagc
cgtgcggccgcctctggagccggctaccgagcctctgtgttgaaagacttggagtatggg
tgtttgaagatccccccgaggtgtatgtttgatcaccccgacgcagacaggacactgcgt
cacctgatctcgggttttgaaaatttcgaaaagaaaatcaactacagattcaagaataag
gcttaccttctacaggcttttacacacgcctcctaccactacaatacgatcacggattgt
taccagcgcttagaattcctgggagatgcaattttggactacctcataactaagcacctt
tatgaagacccacggcagcactccccaggggtcctgactgacctgcgctctgctctggtc
aacaataccatcttcgcgtcgttggctgtgaagtatgactaccacaagtactttaaggcc
gtttctcccgagctcttccacgtcatcgacgatttcgtgcagtttcagctcgagaagaac
gaaatgcaaggaatggattctgagcttaggagatccgaggaggatgaagagaaggaagag
gatattgaagttccaaaggccatgggggatattttcgagtcactcgcgggcgccatttac
atggacagcgggatgtcgctggagacggtctggcaggtgtactatcccatgatgcggccg
ctgatcgaaaaattttctgcaaatgtgccccgttcccctgtgcgagaattgcttgaaatg
gaaccagaaactgccaaattcagcccagctgagagaacctacgatggcaaggtcagagtc
accgtggaagtggtcgggaaggggaagttcaaaggcgttggccgaagttacaggattgcc
aagtctgcagcagcaagaagagccctgcgaagcctcaaagctaatcaacctcaggttccc
aatagctga |