Bison bison bison (American bison): 104997040
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Entry
104997040 CDS
T08726
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
bbis
Bison bison bison (American bison)
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbis04121
]
104997040 (SHPRH)
Enzymes [BR:
bbis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104997040 (SHPRH)
Ubiquitin system [BR:
bbis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104997040 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
PHD
TPR_12
TPR_10
Motif
Other DBs
NCBI-GeneID:
104997040
NCBI-ProteinID:
XP_010849798
Ensembl:
ENSBBBG00000021682
UniProt:
A0A6P3I5S0
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MSSRRKRAPPVRVDEETQQQLCWNMHEDRRNEPLTLTDDEQSYPGLDPSPAHRIILDDSL
KEEVAHREKKRCSKAVSISKSIDKEETGGIFSPLSVKLNIVISPYNFDNSWKAFLGEFTL
QLLPEQCLIENFSEKSFTLMSPKLSNQFLIYVHSGCENIEKKERGLSEPVSICDKGIQVE
SSFSSEMLEDLEWLQKKKRIKLYQKPEENNIIKVGIYLLEAGLAKPDFLSDASSRMKKFN
QLMKRVMEKLYNFIIPDVLEEDEEGSDSEPEGQDIDELYHFVKQTHQQETRSIQVDVQHP
ALTPVLRPYQREAVNWMLQQEHFKSTPASENALHFLWREIVTSEGLKLYYNPYTGCIIRE
YPNAGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGEVVNYFIPSHYSG
GNVKKTETQNMEFEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQR
NRSLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDIYDKTRKQAVGSPRKTQKES
RKSGNKDTDSEYLPSNTSDDDDDPYYYYCKPRRNRSKWRKKPVPSTKREKSQLNISLNPQ
DHCPPTGNSEITDVTTSESTCVFEVNQEHSAKDQAESLNPVGDDMPHSNIMGSYNSSSYR
FECICGELDQVDCKPRVQCLKCHLWQHAKCVNYEEKNLKIKPFYCPHCLVAMEPVSTRAT
LIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSE
LNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPAVKAAEMAQRL
SGINRWCISGTPVQRGLEDLFGLVVFLGVEPYCVRHWWVRLLYRPYCKKNPHFLYSFIAK
IMWRSAKKDVIDQIQIPPQTEETHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALK
LSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEE
AHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKEKLKTDSLQRLHATHNLMEL
LTAKHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALLPVQQTIRDLQRKIHSN
SPWWLNVIQRAIEFGIEEELAQRVRNEITSNYKQQTGKLSMSEKFHDCRGLQFLLTTHME
ELSKFQKQVREAVKNLEGPPSRHVIESATICHLRPVRLPLNCCVFCKADELFTEYESKLF
SHTVKGQTAIFEEMIEDEEGLVDDRITTTNRGLWAISETERSMKALLSFAKSHRFDVEFI
DEGSNSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLH
IIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGINPEPCPICARQ
LGKQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIRCAICRQTTSHKEISYVFTSEKASQ
EEDIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQI
SRVKTFQENLSAFKYDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRV
HRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNPSAKHSEASVLTVADLADLFTKD
TEDLE
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgacggaaacgtgctcccccagtgagggtagatgaggaaacgcaacagcag
ctttgctggaatatgcatgaggacaggaggaatgaacctctcaccttaactgatgacgag
caatcctacccaggtctggacccctctcctgctcaccgcatcatcctagatgacagtcta
aaggaagaagtggctcacagagaaaagaagagatgttccaaagccgtgagcatctcaaaa
tcaattgataaagaagagactggtggcattttttcccctttgtctgtaaagctgaatatt
gtaatttctccctataactttgataattcctggaaggcatttctaggagaattcactctt
cagcttcttcctgaacagtgtttaattgaaaatttttctgaaaagagttttacactgatg
agtcccaagttgagcaatcagttcctgatctatgttcattcaggatgtgaaaatatagag
aaaaaagaaagaggactcagtgagccagtcagtatctgtgacaagggaattcaagtggag
tcatccttcagcagtgaaatgttagaagatttggaatggctgcaaaagaagaaaagaata
aaactttaccaaaaaccagaagaaaataacattatcaaggttggaatttatcttttggaa
gctggcctagcaaaaccagattttctgagtgatgcaagttcaagaatgaaaaagttcaat
caactcatgaagagagtgatggaaaaactatacaattttattattccagatgtgttggaa
gaggatgaggaaggttccgatagtgagccagagggacaggacattgatgaactctatcac
tttgtgaagcagacacatcagcaagaaactcggtccatccaagtggatgtccagcatcct
gcgctgacgcctgtgttgagaccataccaaagagaggctgtcaactggatgctacaacag
gagcatttcaaaagcacccctgctagtgaaaatgccttacactttctgtggcgagaaatt
gttacatctgagggtttgaaactctactacaatccatacacaggctgcatcattcgtgag
tacccaaatgctggaccacagttgcttggtgggatcttagcagatgagatgggtcttgga
aagacagtggaggttttggctctgattctgacacatactcgacaagatgtcaaacaagat
gctctcactcttcctgagggagaagtggtaaattatttcattccatcacattattctggc
ggaaatgtaaaaaagacagaaacccagaatatggaatttgaaccaaaagaaaaagttcag
tgcccccctacacgtgtgatgatcctgacagctgttaaagaaatgaatggaaaaaaagga
gtttctattctttccatctacaaatatgtcagttctatatatagatatgatgttcagcgg
aacaggagtcttctgaaacggatgctcaaatgtttaatttttgaaggccttgtgaaacag
atcaaaggccatggtttttctggtacttttacactgggaaagaattacaaagaagaggat
atatatgataaaacgagaaagcaggcagtggggagtccaaggaaaactcagaaagaatcc
agaaaatcaggaaacaaggacacagactctgaatatttgccatcaaacacctctgatgat
gatgatgatccttactattattattgcaaacccaggagaaatcgtagtaaatggaggaag
aaacctgttccgtccacaaaaagggaaaaaagccagctgaacatcagtctcaacccacag
gatcactgtccacctactggtaactctgaaattactgatgttactacatctgaaagtaca
tgtgtctttgaagtcaatcaagaacattcagcaaaggaccaagctgaatctctaaatcct
gttggtgatgacatgccacattctaatatcatgggttcctataattcttccagttatcgc
tttgagtgcatatgtggtgaacttgaccaggtagactgtaagcctcgtgttcagtgcctg
aaatgccacttgtggcaacatgcaaaatgtgtgaattatgaagagaagaatctgaagatt
aaacctttctactgcccccactgccttgttgcaatggagccagtatccacaagagcaact
ctgatcatctcccccagttccatctgtcatcagtgggtggatgaaatcaataggcatgtg
aggtcatcatctcttcgagtcttggtatatcaaggagtgaagaaagatggttttttacag
cctcattttttggcagaacaggatatagtcatcattacttacgatgtcctccgttcagaa
ctaaactatgtagacatcccacacagcaacagtgaggatgggcgtcgcttaaggaaccag
aagcgctacatggctattcccagtcctcttgtagctgtggagtggtggaggatctgcctt
gatgaagctcagatggtcgaatgtcctgctgtaaaagctgcagaaatggctcagcgcttg
agtgggattaaccgctggtgcatcagtggcactccagtacagagaggactggaagatctg
ttcgggttagtggtatttctcggtgttgaaccttactgtgtcagacactggtgggttcga
cttctctatcgtccttattgcaagaagaatcctcatttcctctacagctttattgccaag
ataatgtggaggtctgcgaagaaagatgtgattgaccaaatccagataccccctcagaca
gaagaaacccactggcttcacttttctccagtggaaaggcatttctatcaccgtcaacat
gaggtgtgctgccaggatgcagtggtaaaactcaggaagatttctgactgggctttgaag
ctcagcagcctggacagaaggaccgtcacctccatcctatatccattgctgaggctccga
caggcctgctgccacccacaggctgttcgtggcgagttcttgccactccaaaaaagcacc
atgacaatggaggaactgctgacatccctgcagaagaagtgtggcactgaatgtgaagag
gcacatcggcagctagtctgtgccctcaatggcttagcaggcatccacatcattaaaggc
gagtatgctttggcagcagaactatatagagaagtgttgcgttcatctgaggaacacaag
gaaaaactcaaaacagattcactgcaaagacttcatgctacccataacttgatggaattg
ttgacagccaagcacccagggatacctcctaccctgagagatggcagacttgaggaagag
gccaaacagctacgagagcattatatgagcaagtgtaacacagaagttgcagaagcccag
caggctttgttgcctgtgcagcagactatccgtgatcttcagagaaagattcattctaat
tctccttggtggctgaatgtgatacaaagagcaatagaatttggtattgaagaggaactt
gctcaaagagtgagaaatgaaataaccagcaactacaagcaacaaactggcaagctttct
atgtcggagaaattccatgactgccgaggacttcagttcttactgacaacacatatggaa
gagctcagtaagttccagaagcaagtgagagaggctgtaaaaaacctggagggacctcca
tctcggcatgttattgagtctgcaacaatctgccatctccgaccagtcagacttcctctc
aactgctgtgtcttttgtaaggctgatgaattgttcacagagtatgagtcaaaactattt
tctcacacagtcaaaggccagactgcaatatttgaggagatgatagaagatgaagaggga
ctggtagatgatcgaataactaccaccaaccgtggcctgtgggcaataagtgagacagag
cgatctatgaaagcactactgtcatttgcaaaatctcacagatttgatgttgaattcatt
gatgagggaagtaattcaatggatctctttgaagcttggaagaaggaatataagttgctt
catgaatactggatggctctgaggaatcgtgtgtctgctgttgatgaacttgcaatggct
acagaacgactgagagtccgtgatcctcgggagccaaagcccaacccaccagttcttcat
atcattgaaccacatgaggtagaacagaatcgtataaaactactaaatgataaagctgtt
gctacatcccagctgcagaaaaagcttgggcagcttctttacctaactaacttggaaaag
tctcaggacaaaacatcaggaggtattaatccagaaccttgtccaatctgtgctcggcaa
ctgggaaaacagtgggcagtactgacctgcgggcactgtttctgtaatgagtgcatttca
attattatcgaacagtacagcgtggggtctcacaggagctccatcaggtgtgccatctgc
cgccagaccacatctcacaaagaaatctcctatgtcttcacctcagagaaagccagccag
gaagaggacatccctgtgaagggcagccattctacaaaagtggaagctgtggtcagaact
ctgatgagaatccagcttagagacccaggggcgaaggcacttgtcttctcaacgtggcaa
gacgtattagacattatttcaaaagctctcactgacaacaacatggaatttgcacagatc
agtcgtgttaagacatttcaggagaacctgtccgcatttaaatatgatccccaaatcaat
attttgctgctgcccctgcacacaggttctaatgggttaactatcattgaagcaactcat
gtgctcttggtggagcccatattgaaccctgcccatgagcttcaggccatcggacgggtg
caccggatcggacaaacaaaacccactattgtacacagattcttaataaaagcgacaata
gaagaaagaatgcaagcaatgctgaaaactgctgaaaggagtcacacgaacccttccgca
aagcattccgaggcctccgtcttgaccgtggctgacctggcagacctgtttaccaaagac
accgaagaccttgaatga
DBGET
integrated database retrieval system
