Bison bison bison (American bison): 104997163
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Entry
104997163 CDS
T08726
Symbol
VPRBP
Name
(RefSeq) LOW QUALITY PROTEIN: protein VPRBP
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
104997163 (VPRBP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bbis01001
]
104997163 (VPRBP)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbis04121
]
104997163 (VPRBP)
Enzymes [BR:
bbis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104997163 (VPRBP)
Protein kinases [BR:
bbis01001
]
Serine/threonine kinases: Other
Other
104997163 (VPRBP)
Ubiquitin system [BR:
bbis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104997163 (VPRBP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mahjong_helical
DCAF1_helical
DCAF1_N
DCAF1_4th
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
104997163
NCBI-ProteinID:
XP_010850089
Ensembl:
ENSBBBG00000000943
UniProt:
A0A6P3IDY4
LinkDB
All DBs
Position
Unknown
AA seq
1507 aa
AA seq
DB search
MTTVAVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR
ELQLQEVGSRQESKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGEQEEASGDMEIS
FHLESGHKTSSRVNSATKLEEGALRKNKSTKQADRESFRKAKQKLGFSSSDPDRMFVELS
NSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYI
DLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYL
SYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRY
DGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVK
QSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLL
LQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGIS
IILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQTPKSSEH
TLAKMWNVVQSNNGIKVLLSLLSVKMPITDADQIRALACKALVGLSRSSTVRQIISKLPL
FSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQ
SRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLP
RTPRIANGIATRLGSHAAVGTSAPSAPAAHPQPRVPQGSLALPGPSHAGNSPVIGRISFI
RERPSPCNGRENRXLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCK
NPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRF
RPISVFREANEDESGLTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITH
LEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIA
HIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNM
NISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDD
LLEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNM
DTVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEED
DNNENAGEDGDNDFSPSDEELANLLEEGEDAEDEDSDADEEVELILGDTDSSDNSDLEDD
IILSLNE
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtagcggtccatgtggactccaaagctgagctcactaccctgttggagcag
tgggaaaaggaacatggcagtgggcaggacatggtacccatccttaccaggatgtctgaa
ttgattgaaaaagaaactgaagaatatcgtaagggggatccagacccatttgatgatcgg
catcctggtcgagctgatccagagtgtatgctgggccatttgctgagaatactcttcaag
aatgatgatttcatgaatgcactggtgaatgcatatgtgatgacaagccgagagccccct
ttaaacactgcagcttgcagactcctactggacatcatgcccgggctggaaactgctgtt
gtctttcaagaaaaggaaggaattgttgagaaccttttcaaatgggcccgagaggctgat
cagccactgaggacatattctactggtctgttaggtggtgctatggagaatcaagacatc
gctgctaactacagggatgagaactcacagctggtggcaatagtgcttcgaagattgagg
gagctgcagcttcaggaagtaggttcaaggcaagaaagcaagcgtcctagcccacgaaag
ctctcctctgaaccccttttgcctctggatgaagaagctgtggatatggactatggcgac
atggctgtagatgtagtagatggcgaacaagaggaagcttctggagacatggagatctcc
tttcatcttgagtcaggccacaagaccagtagcagagtgaactcagcaacgaaacttgaa
gaaggggcattgaggaaaaacaagtcaacaaaacaggctgacagagagagcttcaggaaa
gccaagcaaaagttgggtttttcatcatctgatccagaccgcatgtttgttgaattgtct
aatagcagctggtcagaaatgtccccctgggtgattggcaccaattataccctttatcct
atgactcctgctattgagcagcgacttattctccagtatttgacccctttaggagaatat
caggagttacttcccatattcatgcagcttggatcacgggagttgatgatgttctacatt
gacttaaaacaaactaatgatgtcctgcttacatttgaggcgctcaagcacctagcatct
ctcctgctccacaataagtttgccacagaatttgttgcacacggtggagtacagaaatta
ctggaaattcctcgtccttctatggctgcaactggtgtatccatgtgcttgtattacctg
tcctacaaccaggatgccatggaaagagtttgcatgcatccccacaatgttctgtctgat
gtggtgaactacaccctgtggctaatggaatgttcacatgcctcaggatgctgccatgct
accatgtttttctcaatctgcttctccttccgggctgtgttggaactctttgaccgctac
gatggtcttcgtcgtctggtgaacttgatcagtactttggagattctaaatttggaagat
cagggtgcacttctgagtgatgatgaaatattcgctagccggcagactggtaaacacacc
tgcatggccttgcgcaagtactttgaagctcacctggccattaaattggaacaagtgaag
cagtctcttcagaggactgaaggtggcattcttgttcatcctcaacctccctacaaggca
tgttcatatactcatgaacagattgtggaaatgatggagtttctgatagaatatggccca
gcgcagctgtattgggagccagctgaagtcttcctcaagctgtcttgtgtccagctctta
ttgcagcttatttctattgcttgcaattggaagacctattatgcaaggaatgacactgtg
cgctttgctctggatgtcctggctattctcactgttgtgccaaaaattcagctccagttg
gcagaatcagtggatgtactagatgaggctggctccaccgtctccactgtaggtatcagc
attattttgggagtggctgagggtgagttctttattcacgatgctgaaattcagaagtca
gcacttcagattatcatcaattgtgtttgtggcccggataacagaatttctagtattggc
aagtttatctctggaacgcctcggaggaagctgcctcagacacccaaaagcagtgagcac
actctggccaagatgtggaacgtggtgcagtccaacaacggcatcaaggtgcttctgtcc
ttactgtctgtcaagatgcccatcacagatgcagaccagatccgggccctagcctgcaag
gccctggtgggcctgtctcgcagtagcaccgtgcggcagatcatcagcaaactgcccctt
ttcagcagctgccagatccagcagctgatgaaagagcctgtgcttcaggacaagcgtagt
gaccacgtcaagttctgcaagtacgccgctgagctcatcgaacgggtgtcgggaaagccg
cttcttatcggcaccgatgtgtccctggcacgtctgcagaaagctgacgttgttgcccag
tcacggatctcctttcctgagaaagagctgcttctactgatccgaaaccatctcatttct
aaaggccttggggagacagccactgtgctgactaaagaggccgacctgcccatgactgct
gcctcccattcttcggccttcaccccggtcactgctgctgcttctcctgtttctcttccc
cgcacccctcgcatcgccaatggcattgcaactcgattgggtagccatgctgctgtgggt
acctctgccccttctgcccccgctgctcatcctcagccgcgggtgccccagggttcacta
gctctgcctggtccatctcatgcaggaaactcccctgtgattggtaggatcagttttatc
agagagaggccatcaccctgcaatggcagggaaaacaganggttgcggcagaagtcggac
catggcgcctacagccagagcccagccataaaaaagcagctggacagacaccttccctcc
ccgcctacgctggacagtatcatcacagaatatcttagagagcagcatgctcgctgcaag
aacccagttgccacctgcccacccttctctctctttactcctcaccagtgtcctgagcca
aaacagaggcgacaagcgccaataaactttacctcaaggctaaaccgcagggcatcattt
ccaaagtatggaggggtagatggcgggtgctttgataggcaccttatctttagcaggttc
cgtcctatttcagtgttccgggaagccaacgaggatgagagtggcctcacctgctgtgcg
ttctccgcacgagagcgcttcctgatgctgggcacctgcaccgggcagttgaagctctac
aacgtgttcagtggacaggaggaggccagctacaactgtcacaactcagccatcacacac
ctggagccctccagggatggatccttgctgctgacatcagctacctggagccagcctctg
tctgcactgtggggaatgaaatcagtatttgatatgaagcattcctttacagaagatcat
tatgttgagttcagtaagcattctcaggaccgggtcataggcacgaagggagacatcgcc
catatttatgatattcagactggcaacaagctgttgactctgtttaacccagatcttgcc
aacaactacaagaggaactgcgccacctttaatcctacagacgatcttgtcttaaatgat
ggcgtcctgtgggatgtccgctctgcacaggccatccacaagttcgacaagttcaacatg
aacatcagtggcgtcttccatccgaacgggctggaggtcatcattaatactgagatttgg
gaccttcgaaccttccatcttttacacacagttcctgctctcgatcagtgtcgcgtggtg
ttcaaccacacggggacagtgatgtatggagctatgttgcaggcagatgatgaagatgac
ctattggaagagaggatgaaaagcccttttggatcatccttccgaacatttaatgcgact
gactacaaacctatagcaacaattgacgtgaaaaggaacatttttgacctgtgtacagac
accaaagactgctatcttgctgtcatcgagaaccaaggcagtatggacgcgctgaacatg
gacaccgtgtgcaggctgtatgaagtgggcaggcagcgtctggcggaggacgaggacgag
gaggaggaccaggaagaggaagagcaggaggaagaagacgacgacgaagacgacgacgac
actgatgatctggacgagctggacacagaccagctgctggaggcagagctcgaggaggac
gacaacaacgagaacgcgggggaggatggggacaatgacttctcgccctctgatgaggag
ctggcgaacctcctggaggagggggaggacgcggaggacgaagactcagatgcagatgaa
gaagtggaactgatcctgggggacaccgacagctctgacaactctgatttggaagatgac
atcatcttatctctaaatgagtga
DBGET
integrated database retrieval system
