Bison bison bison (American bison): 104997711
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Entry
104997711 CDS
T08726
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03015
mRNA surveillance pathway
bbis04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104997711 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104997711 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbis03021
]
104997711 (SYMPK)
03019 Messenger RNA biogenesis [BR:
bbis03019
]
104997711 (SYMPK)
Transcription machinery [BR:
bbis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104997711 (SYMPK)
Messenger RNA biogenesis [BR:
bbis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104997711 (SYMPK)
U7-dependent histone pre-mRNA processing factors
104997711 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
104997711
NCBI-ProteinID:
XP_010850926
Ensembl:
ENSBBBG00000014863
UniProt:
A0A6P3IGB6
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MAASSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLNVLKHPASLEFQAQITTLLVDLGTPQVEIARNMPSGKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLPAQGQAISVVGSLSSMSSLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGVKGALDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSAKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMAILEASGKQEPETKEAPAGPLEEDDLEPLALAPPPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGLGGPSSSSSSSSARPGPPQPEEAIDFREEGPECETPA
IFISMDDDSGLTEAALLDSSLEGPLPKETAAGGLLSKEERSPQPLTAAGEDTVQTPSPAT
EEVGEPETKGNR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggcagccagcagtggggacagcgtcacacgccggagcgtggcatcacagttcttcact
caagaggaggggccgggcatcgatggcatgaccacatcagagagagtggtagatctcttg
aaccaggcagcactgatcaccaacgactcaaagatcacagtgctcaaacaggtgcaggaa
ctgataatcaacaaagatcccacactactggacaacttcctggatgagatcatcgctttc
caggcagacaagtccatcgaagtgcgcaaatttgtcatcggcttcatcgaggaggcttgc
aagcgagacattgagctgctgctgaaactgatcgcgaacctcaacatgctcttgagagat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtgatcagtgagctccaggaggcctgctgggatatg
gtgtcggccatggctggggacatcatcctgctgctggactctgacaacgacggcatccgt
acccatgccatcaagttcgtggagggcctcatcgtcaccctttcgccccgcatggctgac
tcggaggtgccccgacgccaggagcacgacatcagcctggaccgcatccctcgtgaccac
ccctacatccagtacaatgtgctgtgggaagaaggcaaggcagccttggagcagctgctc
aagttcatggtgcaccccgctatctcctccatcaacctgaccacagccctgggctccctg
gccaatattgcccgccagaggcccatgttcatgtcagaggtgattcaggcctacgaaacc
ctccacgccaatctgcccccaacgctggccaaatctcaggtgagcagcgtgcgtaagaat
ctcaagttgcacctgttgaatgtgctaaagcacccagcgtccttggagttccaggctcag
atcaccaccctcctggtggacctgggcacgcctcaggtggagattgcccgaaacatgccc
agtggcaaggatgcccgcaagcggccccgagacgactcggattccacactcaagaagatg
aagctggagcccaacctgggggaagacgatgaggacaaggacttggagccaggcccctcg
ggaacctcgaaggcctcagcccagatctcaggccagtcagacacagacatcacagccgaa
ttcctccagcctctgctgacacccgacaacgtggccaatctggtcctcatcagcatggtg
tacctgcccgaggccatgcccgcctccttccaagcgatctacaccccagtggagtcagca
ggcaccgaagcccagatcaagcacctggctcggctcatggccacgcagatgacggccgca
ggactggggccaggcgtggagcagaccaagcagtgcaaggaggagcccaaggaggagaag
gtggtgaagccagagagcgttctgatcaagcggcgcctgccagcccagggccaggccatc
tcggtagtgggctccctgagctccatgtcctccctggaggaggaggcgccccaggccaag
aggaggccggagcccattatccccgtcacgcagccccggctggcgggtgctggcgggcgc
aagaaaatcttccgcctaagtgacgtgctgaagcccctgacggacgcgcaggttgaggcc
atgaagctgggcgctgtgaagcggatcctgcgggccgagaaggccgtggcctgcagcggg
gccgcccaggtgcgcataaagatcctggccagcctggtgacgcagttcgactcgggcctg
aaggccgaggtcctgtccttcatcctggaggacgtccgggcccgcctggacctggccttc
gcctggctctaccaggagtacaacgcctacctcgcagctggcgtcaagggcgccctggac
aagtatgaggactgcctcatccgcctgctctccggcctgcaggagaagccggaccagaag
gacgggatcttcaccaaggttgtgctggaggcgccgctgatcaccgagagtgccctggag
gtgatccgcaagtattgcgaggacgagagtcgcacctacctgggcatgtccactctccga
gacctgatcttcaagcgcccatcccgccagttccagtacctgcatgtcctgctagacctc
agctcccacgagaaggacaaggtgcgttcccaggccttgctgttcatcaagcgcatgtac
gaaaaggagcagctgcgagagtacgtggagaagtttgccctcaactacctgcagctcttg
gtccaccccaacccgccgtcggtgctgtttggagctgacaaggacacagaggtggccgca
ccctggaccgaggagacggtgaagcagtgcctgtacctctacctggctctcctacctcag
aaccacaagctgatccacgagctggcggccgtgtacacggaggccatcgctgacatcaag
aggacagtgctgagggtcatcgagcagccgatccgggggatgggcatgaactcgccagag
ctgctcctgctggtggagaactgtcccaagggggcggagacactggtcacacgttgtctg
cacagcctcacggacaaagtgcccccgtccccagagctggtaaagcgggtcagggatctc
taccacaagcgactgccagacgtccgcttcctcatcccagtgctcaatgggctggagaag
aaggaagtgatccaggccctgccaaagctcatcaagcttaaccccatcgtggtgaaagag
gtcttcaatcgcctgctgggcacccagcacggtgaagggaactcagccctgtcccccctg
aaccctggagagctgctcatcgccttacacaacattgactcggcaaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggaggtg
ctggccgtggtgatgcagcaactgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccttgactatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccggctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcagcgcaccaagcctcagagcttccaggtcatcctgcagctcccaccccagcag
ctgggggccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtccgc
tccttcaccccccaccagcaagcgcacatccccaactccatcatggccatcctggaggcc
agcggcaagcaggagccagagactaaggaagcacctgccgggcccctggaagaggatgac
ttagagcctctggccctggcaccacctccggccccccgaccccctcaagatctcatcggc
ctgcggctggcccaggagaaggccttaaagcggcaactggaggaagaacagaagctgaag
cctgggggactgggaggcccctcctcgtcctcgtcctcttcctcggcgcggccaggcccc
ccccagccagaggaagccattgatttccgggaggaggggcctgagtgtgagaccccggcc
atcttcatcagcatggacgatgactcggggctgactgaggccgcactgctggactctagt
cttgagggacccctacctaaggaaactgcagcaggtggattgctttcaaaggaggagcgg
agcccccagcccctcacagctgctggagaagacacagtgcagactcccagccccgccact
gaggaagtgggcgaaccggagaccaaggggaatcgctga
DBGET
integrated database retrieval system
