Bison bison bison (American bison): 104998673
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Entry
104998673 CDS
T08726
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03008
Ribosome biogenesis in eukaryotes
bbis03013
Nucleocytoplasmic transport
bbis03015
mRNA surveillance pathway
bbis05014
Amyotrophic lateral sclerosis
bbis05164
Influenza A
bbis05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104998673 (NXF1)
03015 mRNA surveillance pathway
104998673 (NXF1)
03008 Ribosome biogenesis in eukaryotes
104998673 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104998673 (NXF1)
05168 Herpes simplex virus 1 infection
104998673 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
104998673 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbis03019
]
104998673 (NXF1)
03009 Ribosome biogenesis [BR:
bbis03009
]
104998673 (NXF1)
Messenger RNA biogenesis [BR:
bbis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104998673 (NXF1)
mRNA cycle factors
Stress granule specific factors
104998673 (NXF1)
Ribosome biogenesis [BR:
bbis03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104998673 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
UBA_8
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
104998673
NCBI-ProteinID:
XP_010852282
Ensembl:
ENSBBBG00000019622
UniProt:
A0A6P3IK88
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MMYFLIFVLFPNPEHDDRVSFPQRRKKGRGPFRWKSGEGNRRSGRGGSSVRSSRLEDDDR
DVAMSDVQDAPRVRYTPYAARPNRRGDNWNERTRIHVTLPLRRDRSAAERGGAGTSQDGT
SKNWFKITIPYGRKYDKSWLLNVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAV
NYKILDRENRRISIIINSSSPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSD
PDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNKLYRLDDLSSIVQKAPNLKI
LNLSGNELKSERELDKIKGLKLEELWLDGNTLCDTFRDQSTYISAVRERFPKLLRLDGHE
LPPPIAFDVEAPTTLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGAC
CSLSIPFTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHD
INSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELF
VRNASADEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWD
YTRSAQAFTHLKAKGEIPEVAFMK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttctaatttttgttctgtttccaaacccagagcacgatgatcgagttagt
ttccctcaaagaagaaagaaaggccgaggccctttccggtggaagtccggcgaggggaac
cggaggtctggaagagggggctccagcgttcggtcctcccgcctggaggacgacgacaga
gacgtagcgatgagtgatgtccaggatgctccccgagtacgatacaccccctacgctgca
cgacccaaccgtcggggtgataactggaacgagcggactcgaattcatgttactctgccc
ctgcggagagatcggtctgctgcagagaggggaggggctggcaccagccaggacgggacg
tccaagaactggtttaagattacaatcccttacggcaggaaatacgacaagtcatggctc
ctgaatgtgattcagagcaagtgcagtgtcccttttactcccattgagtttcactatgaa
aacacacgggcccaattttttgtggaggacgccagtacggcctctgctctgaaggctgtt
aactataagattttggatcgggagaaccgcaggatatctatcatcatcaactcctcttct
ccaccccattctgtgcagaatgaactaaagccagaacaagtagagcagctaaagctgatc
atgagcaaacgatatgatggctcccagcaagcacttgacctcaagggcctccgttcagac
ccagatttagtggctcagaacattgacgttgtcctgaaccgtagaagctgcatggcagcc
accctgcgaatcatcgaagagaacatccctgagctattgtccttgaacttgagcaacaac
aagctctaccggctggatgacttgtccagcattgtgcagaaagcacccaatctaaagatc
ctaaatctatctggaaatgagctgaagtctgagcgggagttggacaagatcaaagggctg
aagctggaagagctctggcttgacggaaacaccctgtgcgacaccttccgagaccagtcc
acttacatcagcgccgttcgagagcgatttccaaaactattgcgactggatggccatgag
ttacccccaccaattgcctttgatgttgaagcccccacaacgttaccaccttgcaaggga
agctactttggaacagagaccctgaagaatctggtcctgcacttcttgcagcagtactat
gcggtttatgactcgggagaccggcagcggctcctggatgcctaccatgatggagcctgc
tgctcgctgagcattcctttcaccccccagaaccctgcccgaagcaacttggccgagtac
ttcaaggatagcaggaatgtgaagaagcttaaagaccctaccctgcggttccgactgctg
aagcacacacgtctcaacgtggtggccttcctcaatgagttgcccaaaactcagcatgac
atcaattcctttgtggtagacataagtgcacagacaagcacattgctgtgtttctctgtc
aacggagtcttcaaagaagtggatggaaagtctcgggactccttgcgagcctttacccgg
acattcgtcgctgttcctgccagcaattcagggttgtgcatcgtcaacgatgagctgttt
gtgcggaatgccagtgctgatgagatccagagagcctttgccatgcctgcacccacaccc
tcctccagcccagtgcccaccctctccccagagcagcaggaaatgctgcaggctttctct
acccagtctggcatgaaccttgagtggtcccagaagtgcctccaggacaacaactgggac
tacaccaggtctgcccaggcctttactcacctcaaggccaagggtgagatcccagaagtg
gcattcatgaagtga
DBGET
integrated database retrieval system