KEGG   Bison bison bison (American bison): 104998673
Entry
104998673         CDS       T08726                                 
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
bbis  Bison bison bison (American bison)
Pathway
bbis03008  Ribosome biogenesis in eukaryotes
bbis03013  Nucleocytoplasmic transport
bbis03015  mRNA surveillance pathway
bbis05014  Amyotrophic lateral sclerosis
bbis05164  Influenza A
bbis05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:bbis00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104998673 (NXF1)
   03015 mRNA surveillance pathway
    104998673 (NXF1)
   03008 Ribosome biogenesis in eukaryotes
    104998673 (NXF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    104998673 (NXF1)
   05168 Herpes simplex virus 1 infection
    104998673 (NXF1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    104998673 (NXF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbis03019]
    104998673 (NXF1)
   03009 Ribosome biogenesis [BR:bbis03009]
    104998673 (NXF1)
Messenger RNA biogenesis [BR:bbis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104998673 (NXF1)
   mRNA cycle factors
    Stress granule specific factors
     104998673 (NXF1)
Ribosome biogenesis [BR:bbis03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    104998673 (NXF1)
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 LRR_4 UBA_8 LRR_8 LRR_9
Other DBs
NCBI-GeneID: 104998673
NCBI-ProteinID: XP_010852282
Ensembl: ENSBBBG00000019622
UniProt: A0A6P3IK88
LinkDB
Position
Unknown
AA seq 624 aa
MMYFLIFVLFPNPEHDDRVSFPQRRKKGRGPFRWKSGEGNRRSGRGGSSVRSSRLEDDDR
DVAMSDVQDAPRVRYTPYAARPNRRGDNWNERTRIHVTLPLRRDRSAAERGGAGTSQDGT
SKNWFKITIPYGRKYDKSWLLNVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAV
NYKILDRENRRISIIINSSSPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSD
PDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNKLYRLDDLSSIVQKAPNLKI
LNLSGNELKSERELDKIKGLKLEELWLDGNTLCDTFRDQSTYISAVRERFPKLLRLDGHE
LPPPIAFDVEAPTTLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGAC
CSLSIPFTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHD
INSFVVDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELF
VRNASADEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWD
YTRSAQAFTHLKAKGEIPEVAFMK
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgatgtattttctaatttttgttctgtttccaaacccagagcacgatgatcgagttagt
ttccctcaaagaagaaagaaaggccgaggccctttccggtggaagtccggcgaggggaac
cggaggtctggaagagggggctccagcgttcggtcctcccgcctggaggacgacgacaga
gacgtagcgatgagtgatgtccaggatgctccccgagtacgatacaccccctacgctgca
cgacccaaccgtcggggtgataactggaacgagcggactcgaattcatgttactctgccc
ctgcggagagatcggtctgctgcagagaggggaggggctggcaccagccaggacgggacg
tccaagaactggtttaagattacaatcccttacggcaggaaatacgacaagtcatggctc
ctgaatgtgattcagagcaagtgcagtgtcccttttactcccattgagtttcactatgaa
aacacacgggcccaattttttgtggaggacgccagtacggcctctgctctgaaggctgtt
aactataagattttggatcgggagaaccgcaggatatctatcatcatcaactcctcttct
ccaccccattctgtgcagaatgaactaaagccagaacaagtagagcagctaaagctgatc
atgagcaaacgatatgatggctcccagcaagcacttgacctcaagggcctccgttcagac
ccagatttagtggctcagaacattgacgttgtcctgaaccgtagaagctgcatggcagcc
accctgcgaatcatcgaagagaacatccctgagctattgtccttgaacttgagcaacaac
aagctctaccggctggatgacttgtccagcattgtgcagaaagcacccaatctaaagatc
ctaaatctatctggaaatgagctgaagtctgagcgggagttggacaagatcaaagggctg
aagctggaagagctctggcttgacggaaacaccctgtgcgacaccttccgagaccagtcc
acttacatcagcgccgttcgagagcgatttccaaaactattgcgactggatggccatgag
ttacccccaccaattgcctttgatgttgaagcccccacaacgttaccaccttgcaaggga
agctactttggaacagagaccctgaagaatctggtcctgcacttcttgcagcagtactat
gcggtttatgactcgggagaccggcagcggctcctggatgcctaccatgatggagcctgc
tgctcgctgagcattcctttcaccccccagaaccctgcccgaagcaacttggccgagtac
ttcaaggatagcaggaatgtgaagaagcttaaagaccctaccctgcggttccgactgctg
aagcacacacgtctcaacgtggtggccttcctcaatgagttgcccaaaactcagcatgac
atcaattcctttgtggtagacataagtgcacagacaagcacattgctgtgtttctctgtc
aacggagtcttcaaagaagtggatggaaagtctcgggactccttgcgagcctttacccgg
acattcgtcgctgttcctgccagcaattcagggttgtgcatcgtcaacgatgagctgttt
gtgcggaatgccagtgctgatgagatccagagagcctttgccatgcctgcacccacaccc
tcctccagcccagtgcccaccctctccccagagcagcaggaaatgctgcaggctttctct
acccagtctggcatgaaccttgagtggtcccagaagtgcctccaggacaacaactgggac
tacaccaggtctgcccaggcctttactcacctcaaggccaagggtgagatcccagaagtg
gcattcatgaagtga

DBGET integrated database retrieval system