Bison bison bison (American bison): 105000486
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Entry
105000486 CDS
T08726
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03040
Spliceosome
bbis05202
Transcriptional misregulation in cancer
bbis05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105000486 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
105000486 (DDX5)
05205 Proteoglycans in cancer
105000486 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbis03041
]
105000486 (DDX5)
03009 Ribosome biogenesis [BR:
bbis03009
]
105000486 (DDX5)
Enzymes [BR:
bbis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105000486 (DDX5)
Spliceosome [BR:
bbis03041
]
Complex A
U1 snRNP components
U1 related factors
105000486 (DDX5)
Complex B
105000486 (DDX5)
Ribosome biogenesis [BR:
bbis03009
]
Eukaryotic type
Pre-60S particles
Helicases
105000486 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
105000486
NCBI-ProteinID:
XP_010854710
Ensembl:
ENSBBBG00000014507
UniProt:
A0A6P3IU64
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttattcgagtgaccgagaccgtggccgggatcgagggtttggtgctcctcga
tttggaggtagtagggcagggcccttatctggaaagaagtttggaaatcctggagagaaa
ctggttaaaaagaagtggaatcttgatgagctgcctaagtttgagaagaatttttatcaa
gaacaccccgatttggctaggcgtacagcacaagaggtagagacatacagaagaagcaag
gaaattacagttagaggtcataattgcccgaagccagtcctgaatttttatgaggcaaac
ttccctgcaaatgtcatggacgtgattgcaaggcagaacttcactgaacccacagctatt
caagctcagggatggccagttgctctaagtggattggatatggttggggtagcacaaact
ggatctgggaagactttgtcttatttgctgcctgccattgtccacatcaatcatcagcca
ttcctagagagaggtgatgggcctatttgcttggtgctggcacctactcgggaactggcc
caacaggtacagcaagtagctgctgaatactgtagagcatgtcgcttgaagtctacttgc
atttatggcggtgctcccaagggaccacaaatacgtgatttggaaagaggtgtggaaatc
tgtattgcaacacctggaagactgatagactttttagaatgtgggaaaaccaatctaaga
agaaccacctaccttgtccttgatgaagcagatagaatgcttgatatggggtttgaaccc
caaataaggaagattgtggaccagatcagacctgacaggcaaaccctaatgtggagtgct
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactatattcatata
aacattggtgcactagaactgagtgcaaatcacaacattcttcagattgtggatgtgtgt
catgacgtagaaaaggatgaaaagcttattcgtctaatggaagagatcatgagtgaaaag
gagaacaaaaccattgtttttgttgaaaccaaaagaagatgtgatgaactcactagaaaa
atgaggagagatgggtggcctgccatgggtatccatggtgacaagagtcaacaggaacgt
gactgggttctaaatgaattcaaacatggaaaggctcctattctgattgctactgatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgggaagctaatcaagcaattaatcctaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccggcgggacagatactctgcgggc
aagaggggtggatttaatacatttagagacagggaaaattatgaccgcggttactctagt
ctgcttaagagagattttggggcaaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaagtaattttgtgtctgctggtatacagaccagttttaggact
ggtaatccaacagggacttaccagaacggttatgatagcactcagcaatatggaagtaac
gttccaaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctactgcagct
gcgcctatgattggttatccgatgccaacaggatattctcaataa
DBGET
integrated database retrieval system
