Bison bison bison (American bison): 105000500
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Entry
105000500 CDS
T08726
Symbol
SMARCD2
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03082
ATP-dependent chromatin remodeling
bbis04714
Thermogenesis
bbis05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105000500 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105000500 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105000500 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbis03021
]
105000500 (SMARCD2)
03036 Chromosome and associated proteins [BR:
bbis03036
]
105000500 (SMARCD2)
Transcription machinery [BR:
bbis03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105000500 (SMARCD2)
Chromosome and associated proteins [BR:
bbis03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105000500 (SMARCD2)
PBAF complex
105000500 (SMARCD2)
GBAF(ncBAF) complex
105000500 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
105000500
NCBI-ProteinID:
XP_010854730
Ensembl:
ENSBBBG00000014270
UniProt:
A0A6P3IU85
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPXPAGGVGAPGAAFRP
MGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPASSPFGTAAPLRPGMPPTMMDPFRKRLLV
PQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQ
EAIKKPLTQKRKLRIYISNTFSPSKAEGDTAGTTGTPGGTPAGDKVASWELRVEGKLLDD
PSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLL
LMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQ
IFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPSDQKKTACYDIDVEVDDPLKAQMS
NFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKI
ITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcccccgctgagccctggcggcggcgcg
gttgccgcggccctgggagcgccgcctccgccggcgggacccggcatgctgcccggaccg
gcgcttagggggcccnggccggctggaggcgtgggggccccgggcgctgccttccgcccc
atgggccccgcgggcccggcggcgcagtaccagcggcctggcatgtccccagggagccgg
atgcccatggctggcttgcaggtgggaccccctgccagctccccctttggcacagctgct
ccacttcgacctggcatgccacccaccatgatggacccattccgaaaacgcctgcttgtg
cctcaggcccagcccccgatgcctgcccagcgccgggggttaaagaggaggaagatggca
gataaagttctacctcagcgaattcgggagcttgttccagagtctcaggcgtacatggac
ctcttggcttttgaacggaagctggaccagaccattgctagaaagcggatggagatccag
gaggccatcaaaaagcctctgacgcaaaaacgaaagctgcggatctatatttccaataca
ttcagtcccagcaaggcagaaggtgacactgcaggaaccacagggacccccggaggaacc
cctgcaggggacaaggtggcttcctgggaactccgagtagagggaaaactgctggacgat
cctagtaaacagaagcggaagttttcttccttctttaagagccttgtcatcgagctggac
aaggaactgtacgggcctgacaaccacctggtggagtggcaccggatgcccaccacccag
gagacagacggcttccaggtgaaacggcccggagacctgaacgtcaagtgcaccctcctg
ctcatgctggatcatcagcccccgcagtacaagctggacccccgcctggcgaggctgcta
ggggtgcacacgcagacgagggctgccattatgcaggccctgtggctctacatcaaacac
aaccagctgcaggacggccacgagcgcgagtacatcaactgcaaccgctacttccgccag
atcttcagctgcggccgactacgtttctctgagattcccatgaagctggcggggttgctg
cagcatccagaccccattgtcatcaaccacgtcatcagcgtggaccctagcgaccagaag
aagacagcctgttacgacatcgatgtggaggtggatgacccgctcaaggcccagatgagc
aattttctggcctctaccaccaatcagcaggagatcgcctcccttgatgtcaagatccac
gagactattgagtccatcaaccagctgaagacccagagggatttcatgctcagttttagc
actgacccccaggacttcatccaggagtggctccgttcccagcgccgggacctcaagatc
atcactgatgtgattgggaacccagaggaggagagacgagcagctttctaccaccagccc
tgggcccaggaagcagtggggaggcacatctttgccaaggtgcagcagcgaaggcaggaa
ctggaacaggtgctgggaatccgcctgacctaa
DBGET
integrated database retrieval system
