Bison bison bison (American bison): 105000759
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Entry
105000759 CDS
T08726
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-4(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04151
PI3K-Akt signaling pathway
bbis04510
Focal adhesion
bbis04512
ECM-receptor interaction
bbis04820
Cytoskeleton in muscle cells
bbis04974
Protein digestion and absorption
bbis05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105000759
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105000759
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105000759
09142 Cell motility
04820 Cytoskeleton in muscle cells
105000759
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105000759
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
105000759
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbis04147
]
105000759
00536 Glycosaminoglycan binding proteins [BR:
bbis00536
]
105000759
Exosome [BR:
bbis04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105000759
Glycosaminoglycan binding proteins [BR:
bbis00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105000759
Hyaluronan
Extracellular matrix or blood plasma proteins
105000759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
105000759
NCBI-ProteinID:
XP_010855056
UniProt:
A0A6P3IL59
LinkDB
All DBs
Position
Unknown
AA seq
2294 aa
AA seq
DB search
METWKMFWGIIFFAAGFGFIKSQRIGLSSAVCGEASAGDLVFLVDPSVHPKNMHSVRSFL
NTMVHSFGVSREVVHSEFLLSPYARKDXVLRHIQKLPFTPGARXIDQALRFLLEHHLQGA
AGSRASRGMGVGRGGHRRPAGDRVWGAAGALRSAASRSTRGRRGRASRRAPGDRQPARGT
FVTRVPDCAGLRRLAPKLRQDICDTLASAAAPVGHTSPVCREAVLADIVFLVDSSTSIRP
QSFQKVKSFLHSIVSGLDISSSQVRVGLAQYNDRVYPGFRLNQHPLKSAVLKRIRNLPYR
TGGTNTGSALEFIRTNYLTEAAGSRAXDGVPQIVILVTDGESNDEVQEAADRLKRDGVVV
YVVGVNVQDVQELQTIASEPLEKFLFNTENYNILQDFSGSILQTLCLAVEGKIQESTQRY
ADVVFLADTSQDTLQTSFQWMQNFTSGVVRMLDAGRDKYQIGLAQYGGQGHTEFLLNTYQ
TQDEMMTHIHGHFVLQGGSRRTGKALQYLHRTFLQEATGSRFLQGMPQYAMVITSGKSED
EVHEAVQTLREKGVQVMSVGVQDFDSRELEAVGTPPLVYDMQGQDGVRQVIQDVSGVIQG
TGQLETKQEAKTEPIVECLTAIPADLVFLIEDFSRAQQSNFQQVVSFLKTTIRSLSVHPD
VVRVGLVFYSEEPXLEFSLDAFQNRVKILEHLDKLTHRGRAGQTKTGVALDFLRNEVFIQ
EKGSRSQQGVQQVVVVIMAGSSQDNVSRPASLLHKAGMTIYAVGSQLALESTDLEKIASY
PPWKHVILLESFLQLAVVGSKIKNQLCPELLSNIPLCISFLPRLAAASSCLGCVHIEKAD
IYFLIDGSGSTHQDDFLALKVFMSEVIRMFHVGPDRVQFGVIQYWDEVSPQFTLSQHSSV
AGLEVAVDSIQQKGEGTKTGEALGSMIQVFADSARSNVPWYLIVVTDGQSMDPVADAAEA
LRGHGVTIXAVGVRDANIAELQEIAEDRMFYVHDFESLKTIQQEVVQDICSLETCKNRKA
DIIFLMDGSESISPKDFEKMKEFMKRMVNQSNIGADEIQIGLLQFSSDPQEEFRLNRYSS
KVDIHRAISDVKQINGGTYTGKALNFTLPFFGSSRGGRPSVHQYLIVVTDGVSRDNVALP
AKALRDRNIIIFAIGVGEVKFSQLLEITNDQSKVYYEEKFESLQNLEKEILYQVCIPQGC
SVDLSVGIDLSTPTRQVQQRLRGLLQELMQELAVLPNISCDVTGQTNVMLRYLVPSSKGQ
LIFDSGFEKYSDETIQKFLIHQVARSNHMDVHFLQSLGESAIRMSSANVKVLLVFTDGLD
DDLEKLKEVSELLRSKGFSGLLTIGLEGVHKLEELQELEFGRGFAYNQPLSITLHSLPSI
LLKQLDTIVERTCCNRYAKCFGEAGHRGDGGSPGGKGERGSDGLPGYPGEEGSHGERGPR
GLSGPRGEEGCWGTRGAKGARGFSGEKGNPGEEGVDGLHGDQGDRGVPGSPGEKGNRGNR
GLMGPPGQRGERGEPGLRGDPGDPGIDSPIQGPEGEKGRRGRQGSSGIDGPPGEIGNVGP
QGSRGRRGLQGLKGVRGESGEEGSQGELGSPGSQGPRGRRGAPGSFGEKGLVGAQGNPGP
PGPNGSKGKDGSRGMKGELGDVGERGPPGLQGPRGQPGLPGPEGYGHPGRKGTKGEPGFP
GYPGAQGEDGDPGHRGEKGAKGIRGKRGKAGLPGFAGTRGDPGPPGPVGIKGPKGVVDMM
PCEIIKFARENCPCSAGVSKCPAFPTEVVFALDTSDDVSRLDFERMRDILLSLLMKMEIS
GSNCPVGARVAIVSYSNRTDYLVRLSDRKAGPALLQAVRGLSLAGSSGSRRLGDAMRFVA
RHVFKRVRAGRLLRKVAVFFQAGLTPDAGSISTAMLELSALDIAAAVITFTEDHGLPDAL
LMNGSNRFHLYVWETESQQRVERMARCTLCYDQCLPALECGRGRPGPLQVDADIAFLVDG
SRGVGADLYRVALTLVDAVLDELEVARQPSTSPRGARVALVTHTTPGFWPGEGRSPVLEG
FHLTAYGHRAQMQRSIREASGHPLRGAPALGHALEWTLEKVLLAAPLLQRAQVLFAIVAS
ETSSWDREKLRTLSLEAKCKGVTLFVLALGPGVGTRELAELVHVASSPSEQHLLHLEGVS
EAEVAYALGFTRAFLNLLKSDTNQYPPPELIEKCGGPSRGDTLLQRILPVKRLPKRQFGK
SGLTDDLEALEAAGSFREENREATMTQKKELFLVFKGVLKAIKGPKGWSDLNDCSSSGLN
HCCPLPSSSSPLLC
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atggagacttggaagatgttttggggaatcatcttctttgcagctggttttggcttcatc
aagtcacagagaattggcctctcttctgcggtgtgcggggaagcctctgcaggggacctg
gtgtttctggtggaccccagcgtccaccccaagaacatgcacagcgtgcggagcttcttg
aacaccatggtccacagcttcggtgttagcagggaggtggtccactccgagttcctgctg
tccccctatgcccgcaaagactaggtgctgagacacatccagaagctgcccttcactcct
ggggcccgcnnaattgatcaggccctgcggttcctgctagagcaccacttacagggagcg
gccgggagccgcgcgagccgggggatgggggtggggcgaggtggtcatcggcggccggcg
ggggaccgcgtgtggggggccgccggcgccttgaggagcgcggcgtcccgctccacgcgg
gggcgtcggggccgcgcgtcccgccgagctccgggagatcgccagccggcccgcgggacg
tttgtcacccgtgtccccgactgcgcaggcctgcgccggctcgccccgaagctgcgccag
gacatctgcgacactttggcaagcgcagcggcacctgtgggccacacttctccagtttgc
agagaggcagtcctggcagacattgtcttcctcgtagacagctcaaccagcatcaggccc
cagagcttccagaaggtgaagagcttccttcactccattgtctcagggctggacatcagc
agcagccaggtccgagtgggacttgcgcagtataatgacagagtctacccgggctttcgg
ctgaaccagcatcccctgaagagtgcggtcctgaagcggattcggaacctgccctatcgg
acagggggcacaaacacagggagtgccctggagttcatcaggaccaactacttgactgag
gcagctggcagccgggcangggatggggttccccagatagtgatcctggtgacagatggg
gagtccaatgatgaagtccaggaggcagctgacaggttgaaacgagacggggttgtggtg
tatgtggtaggggtcaacgtccaggatgtccaggagctgcaaaccatagccagtgagcct
ctggagaagtttctcttcaacactgaaaactacaacatcctgcaggatttctcaggaagc
atcctccagactctgtgcttggccgtggagggcaagatccaagaatctactcagcgctat
gcggatgtggtctttcttgccgacacctcacaagacacattgcagaccagtttccagtgg
atgcagaatttcacctctggagtggtgcgcatgctggatgctggcagggacaagtaccag
attggtctggctcagtatggtggccagggtcacactgagtttttgctcaacacttaccag
acccaggatgagatgatgactcacattcatggacactttgtgctccagggaggctccagg
aggacaggcaaagctctgcaataccttcatcggaccttcttacaggaagcaacgggaagc
cggtttctccagggcatgccccagtatgccatggtnatcacttcagggaaatctgaggat
gaggtccacgaagctgtgcagacattgagggagaaaggcgtgcaagtcatgtctgtgggt
gttcaagactttgacagtagagaattagaggcggtggggaccccaccccttgtgtatgat
atgcaagggcaagatggggttagacaggtgatacaggatgtgagtggggtgatccaaggc
actgggcagctcgagaccaagcaggaagccaagacggagcctatagtagagtgtctgact
gctatcccggctgacttggtattcctcattgaggactttagcagggctcagcaatcgaat
ttccagcaagttgtcagtttcttaaagaccaccatcagatctctcagtgttcatccggat
gtcgtgcgggttggcttggtcttctacagcgaggaaccatgacttgagttttctctggat
gcatttcagaatcgagtcaagatcttggagcatctggacaaactaactcacaggggaaga
gcaggacagactaagactggtgttgcgttggatttcttaaggaatgaggttttcatccag
gagaagggcagccggtcccagcaaggtgtgcagcaggtagtcgtggtcatcatggcaggc
tcctcccaggacaacgtgtccagaccagcttccctcctccacaaggcagggatgaccatc
tatgcagtgggctcccagcttgccttggagagcacggacctggaaaagatagcatcatat
cccccttggaagcatgtcatcctcctggaatcttttttgcaacttgctgttgtgggaagc
aagattaagaaccagctctgtcctgagcttctgagtaatattccattgtgtatatctttc
ctgccacggcttgctgctgcttcttcttgcctaggctgtgtgcacatcgagaaggcagac
atttacttccttattgacgggtctggcagtacccaccaagacgactttctcgcactgaag
gtgttcatgagtgaggtgataaggatgttccacgttggacccgacagagtccagtttgga
gtcattcagtactgggacgaagtcagtcctcagtttaccctcagccagcactccagtgtg
gcggggctggaggtagccgttgacagcatccagcagaagggagagggcaccaagacgggt
gaggccctgggcagcatgatccaggtctttgcagactctgctcgcagcaacgtgccttgg
tatctcatcgttgtcactgacggccaatctatggacccggtggctgatgctgcagaggcg
ctgaggggccatggagtcaccatttaagcagttggagtcagagatgctaatattgctgag
cttcaagagattgctgaagacagaatgttttacgtgcatgattttgagtccttgaagacc
atccaacaagaagtggtacaagacatctgttccttagagacctgtaagaataggaaagct
gacattattttcctgatggatggttcagaatccatctctccaaaagactttgaaaagatg
aaggaattcatgaagcgaatggtcaaccagtctaatattggtgctgatgagattcagatt
ggccttctgcaattcagctcagacccccaggaagaattcaggctcaaccggtactcctca
aaggtggacattcacagagccatctcagacgttaagcaaatcaatggtggcacatacact
gggaaagctctgaactttactctgcctttttttgggagttcaagaggagggaggcccagt
gtccatcagtatttgattgtggtcactgatggggtctcccgggacaacgtagctttacca
gccaaggccctgagggacagaaacataattatttttgccattggggtgggtgaagtcaaa
ttctctcagcttttggagatcaccaacgaccagagcaaagtgtactatgaagaaaaattt
gagtccctgcaaaatctggagaaggaaattctttaccaggtttgcattccgcaaggatgc
agtgtagatttgtctgtaggaattgatctctccactcccacgaggcaagttcagcagagg
cttcgaggattattgcaagagctgatgcaggagctggctgtgcttcccaatattagctgt
gacgttacaggccagaccaacgtgatgctccgctacctggttcccagctcaaagggccag
ctcatctttgactcaggatttgaaaagtacagtgatgagaccattcagaagttcttgatt
caccaggttgccaggagcaaccatatggatgtacattttttgcagtccctgggagagagt
gctatccgtatgtcttctgccaatgtgaaggtcctgctagtgtttacagatggactggat
gatgatttagagaaactgaaggaagtatctgagcttctccgcagcaaaggattctctgga
ctcctgactattggcctggaaggcgtccataaattagaggagctccaggagctagaattt
ggcagaggatttgcgtataatcaacctctgagcatcacactgcacagccttccgagcatc
ttactgaagcaacttgacacaattgtagaaaggacatgctgcaataggtatgcaaagtgc
tttggagaggccgggcacagaggtgatggtgggagcccagggggaaagggagagaggggt
tctgatgggttacctggttatcctggtgaagaaggtagtcatggagaaagaggcccccga
ggcctttctggaccccgaggtgaggaaggttgctggggtacacgaggtgccaagggagca
agaggattttcaggagaaaaaggcaaccctggtgaggagggtgttgatggcttgcacgga
gaccagggtgatcgtggagtcccagggtcaccaggagaaaaagggaatcgaggaaatagg
ggcttgatgggaccacccggacaacgtggagagcgtggagagcctgggctaaggggagat
cctggggatcctggaattgatagtcccatccaaggccctgagggagaaaaaggaaggcgt
ggacgccagggaagttccggtattgatggacctccgggggaaatagggaatgttggccct
cagggttcaagaggaagacgaggcctgcaagggctgaagggtgtgcgtggagaatctggt
gaagagggctcccaaggagagctggggtctccaggttcacagggaccaagaggaaggcga
ggcgcaccaggaagttttggagaaaaaggcttagtgggtgctcaggggaatcctgggcct
ccaggcccaaatggttcaaaaggaaaagatggatcaaggggaatgaagggagagcttggt
gatgtaggagaaagaggaccgccaggtctacaaggaccaagagggcaacctggtcttccc
ggtccagagggatatggacatccaggaagaaaaggaacaaagggtgaacctggatttcct
ggctaccctggtgcacaaggagaagatggtgacccaggccaccgaggagagaagggggca
aagggaatcagagggaagaggggtaaggctggacttcctggatttgctggaactcgaggt
gacccaggccctccaggaccggtgggcatcaagggtcccaaaggtgtggtagatatgatg
ccttgtgaaatcatcaagttcgctcgtgaaaattgcccctgttcagcaggtgtttccaaa
tgcccagcgttcccgaccgaggtggtcttcgccttggacacgtcagatgacgtctcccgg
ttggattttgagaggatgagagacattttactgtctctgctgatgaagatggaaatcagt
gggagtaactgccccgtgggtgcacgggtggccattgtctcctacagcaacagaaccgat
tacctggttcgcctctctgaccgcaaggcagggcctgcgctcctgcaggcggtcaggggg
ctgtcactggcagggtcatctggcagccggcgccttggggacgccatgaggtttgtggct
agacacgtattcaagcgcgtgcgtgcgggccgcctcctgaggaaggtggcagtgttcttc
caggcgggcctgaccccggatgcaggttctattagcaccgccatgctagagctcagtgcg
ctggacatcgctgctgcggtcatcaccttcacggaggaccacggcctcccggatgccctg
ctgatgaatggaagcaacagatttcatctgtatgtctgggagacggagagccaacagcgt
gtggaacgcatggcccgctgtaccctctgctatgatcagtgcctcccggccctggagtgc
gggcggggcaggcccgggcctctgcaagtggatgcggacatcgccttcctggtggacggc
tcccgcggcgtgggcgccgacctctaccgtgtagccttgaccttggtggacgccgtgctc
gacgagctggaggtggctaggcagccgagcacgtctccccgtggagcccgcgtggccctg
gtgacacacacaacccccggcttctggcctggagaggggaggtcccccgtgctcgagggc
ttccacctgaccgcgtatggccaccgggcacagatgcagagaagcatccgcgaggcctcg
ggccaccccctgcggggagcgccggccctgggccatgccctggagtggacgctggagaag
gtgctcctggccgccccgctgctccagagggcgcaggtcctctttgccatcgtggccagc
gagaccagcagctgggaccgggagaaattaaggactctgtccctggaggccaagtgcaag
ggcgtcactctgtttgtgctggccttgggcccgggcgtggggacccgcgagctggcagag
ctggtccatgtggccagctccccctcagagcagcacctgctacacctggaaggggtctca
gaggcagaggtggcttatgccctgggcttcacgcgggccttcctgaacctcttaaaaagt
gacactaatcagtacccacctccagagctcattgaaaagtgtgggggcccaagccgaggg
gacaccctgctgcaacgcatcttgcctgtcaagaggttgcccaagcgccagtttggcaaa
tctggccttactgatgatttggaagcactcgaagcagcaggctcttttcgagaggagaat
agagaagccacaatgactcagaagaaagagctgtttcttgtctttaagggtgtgctgaaa
gccatcaagggaccaaagggctggtcagacctcaatgactgcagctcctcagggctgaat
cactgctgcccactgccttcctcgtcaagtcctctcctgtgttag
DBGET
integrated database retrieval system
