Bison bison bison (American bison): 105000933
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Entry
105000933 CDS
T08726
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105000933 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
bbis04091
]
105000933 (FREM1)
Lectins [BR:
bbis04091
]
C-Type lectins
Lecticans
105000933 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
105000933
NCBI-ProteinID:
XP_010855326
Ensembl:
ENSBBBG00000018588
UniProt:
A0A6P3IM00
LinkDB
All DBs
Position
Unknown
AA seq
2180 aa
AA seq
DB search
MSSPSWGGLGALLLLLLLPGWASPTFVRVNQGVRVMKGSSAFLSQDDLKFTIPKEKDACK
VEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVKLRLYRFTETDTFTE
TFILRVYLLEPDCNIIRMSDNALEVSEFYGLSRVIDKNLLRFDYERMASLECTVRLDPVG
THLPAHGQLVLVEPQLEEPRGDQPHSFFPESQLGTELKCPGGRCTLGLKKVGSLKVSCEE
FLLMGLRYQHLGSPSPNIDYFSIQLDLTDSRSKISYKSESAWLPVYIRPGIPNQIPRAAF
MAMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLWDHTRPVSSFT
WKDLRDMQIAYQPPNSSHSERRLYEVELEVYDFFFEKSAPVTVHISIRTTDTNAPRVSWN
TGLNLLEGQSRAITWEQFQIVDNDDIHAVQVVTVDGLQHGRLTVRAGKGFLFTVADLQAG
VVRYHHDDSDSTKDFVVFRIFDSQHSIQHKFPINILPKDDSPPFLITNVVIELEEGQTIL
IQGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPAPGLIGYPVPGFIQRDLFNGIIYYR
HFGGEIFEDSFEFVLWDSHEPPNLSVPQVVTIHVTPVNDQLPKEAPGVSRHLVVKETEVA
YITKKHLHFIDTESQDRELLYTITTPPFFSSSRRHLDAGKLFMVDSIPRLTKTPAAPGLK
YFTQHAVNHMKVAYMPPMQDVGPHPRHVQFAFSVSNQHGGTLYGICFNITILPVDNQAPK
VFTKPLRVAEGGQCVISTQHVLVSDEDTKLDNIYLSLQSPPQHGMVELNGFPLNKGTTFP
WGDLQALKLRYQHNGSEELQDDIVLQVTDGTNAAEYVLHVEVFPVNDEPPVLKADLIPMM
HCSEGEEVVITSEYIFATDVDSDDLKLIFMIVGEPQHGTVRRAGVTVRQFSQEDVVAGAV
TYKHTGGEIGLMPCFDTITLVVSDREAGPFVNGCCYNGPHPSVPLHESFPMYDLNITVYP
VDNQPPSVAIGTTFIVDEGFSAALTVNHLSATDPDTAADDLEFVLVSPPQFGYLENTLPS
AGFEKSNMGISIASFQWKDMKALHINYVQSRHLGMEPTADKFVLYVTDGKQRSMEIPFYI
IINATNDEAPDFIVQNITVCEGQMRELDSSIISATDRDIPKNPLLFSITHKPRHGLLINR
AFSRNFFQYKQLANPGQKHELVYNFSMELLKNGMRLMYVHDDSESLADDFTIQVSDGKHK
ILKTIFVEVTPVNDEKPMLSKKAEITINMGETRIISSAVLSAIDEDSPREKIYYIFERIP
QNGQLQLKIGRDWVPLYPGMKCTQEEVDLNLLRYTHTGAMDSKNQDSFTFRLWDGDNRSP
AFDCHITIKNMGKGDIVILAKPLVVSKGDRGFLTTTTLLAVDGTDKPEELLYVITSPPQF
GQVEYVRYPGVPITSFSQMDIAGQTVCYVDKSTTAVHRDTFRFIVSNGLQTKPGVFEITL
ATVDTALPVVTRNKGLRLVEGATGLLSPDLLQLTDPDTPAEKLTFLLAQLPRHGQLYLRG
MALIPHNFTQLDVDSGHVAYRHLGGDSWTDHFTFVATDGTNHGFLVDGRVWQEPVSFTIQ
VDQLDKAAPRVTHLHSPSQVGLLKNGCYGIYITSRVLKASDPDTDDNQIIFKILRGPQHG
HLENSTTGEFIHEKFSQKDLNSKTILYIINPSLEVNSDTMEFQVMDPTGNSATPQSLELN
WSHIEWSRTEYEVCENMGMLPLEITRRGYSMDSAFVTVQVNQVSATVGKDFTMTPSKLVQ
FDPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKTAVKILDSKGGQCHPSY
AFNSNMPSAWEKGIWHLLSPGASSPTTSDSFHLERRPLPTSKQLAVTRGDALRDFGSEDL
SPVKLRTRGDGKTVPPSSVYKNRTDIIYNYHGVISLKLEDDGSPARRRKANVSFISEPQK
TTKVAEPPQADKEESTTGSHFPRQDPLPSFPKNCTLELKGLFHFEESLQKLYKCDGIAWR
SWSPHTKEVEDKSCPAGWHHHSGYCHSLITEQKGTWTTAAQACREHYQGSLVTVISRQHM
RWLWDISGRKPFWIGLNDQVRAGHWEWIGGEPVTFTNWRRGPPQRSRHGKDCVLVQRPGK
WHTKDCRKGKSHSYVCSRKL
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccaagctggggtgggcttggtgccctgctcctgctgctgctgctcccaggc
tgggccagccccacctttgtccgtgttaaccaaggggtcagggtgatgaagggcagttct
gccttcctgtctcaagatgacctgaagttcaccatccccaaagagaaagatgcctgcaaa
gtggaagtcgtgatgaatgagccaataacccagagggttgggaaactcactccacaggtc
tttgactgccatttccttcccaatgaagtaaaatatactcataacggttgcccaattctt
gatgaagacacagtgaaacttagactttacaggtttactgagacagacaccttcacggaa
acctttatcctgcgggtctacctcctggaaccagactgtaacatcatccgaatgagtgat
aatgcactggaggtgtctgagttctatggcctgtcccgagtcattgataagaacctgctt
agatttgattatgagaggatggccagcctggaatgcacagtcagactggaccctgtggga
actcacctgccagcccacggccagttggttctggtggagccccagctggaagaacctcgc
ggagatcagccacatagtttcttccctgagtctcaattgggaacagagctgaagtgtcca
ggtggcaggtgtaccctgggactgaagaaagtcggaagtctcaaagtgagctgtgaggag
ttcctgctgatggggcttcgataccagcacctgggttccccttctcccaacattgattac
ttctccatccaactggacctcacagatagcaggagtaaaatctcatacaagtcagagagt
gcgtggttgcctgtctatatcagacctggaattcccaatcagattccaagagctgcattt
atggccatgtttattctggaagtggatcagttcatcctgacctcattgactacatcggtt
ctggactgtgaagaggatgagacccccaaacccttgctggtgttcaacattactaaagcc
ccactccagggctatgtgactcacctgtgggatcacaccagaccagtgtcctccttcacc
tggaaggatctaagggatatgcagattgcctatcagccaccaaacagcagccattctgag
aggagactttatgaggtggagttggaggtctatgacttcttctttgagaagagtgcacct
gttacagtccacatttccatcagaacaacagatacaaatgccccgcgagtgtcctggaac
acaggtctgaatctcctggagggacagtctagggccatcacatgggaacagtttcagatt
gtggacaatgatgacattcatgctgtccaggtagtcactgtggacggcctgcagcatgga
cggcttactgtgagagcggggaaggggtttctcttcaccgtggctgaccttcaggctgga
gtcgttcgatatcatcatgatgacagtgactccaccaaagactttgtggtcttcaggata
tttgacagccagcacagcatccaacataagtttcccatcaacatcttgcccaaagatgac
agtccgccatttctcataacaaatgttgtgattgaactggaggaggggcagaccatacta
atccagggttccatgctgagagcttcagacatggactccagtgatgactacatcttcttt
aatatcacgaaacccccacaagctggagagatcatgaagaaaccagcaccaggactgata
ggctatccagtccctggcttcattcagagggatctgttcaatggcatcatttactatcgt
cactttggtggagaaatctttgaagattcatttgaatttgtcctgtgggacagccacgaa
cctccaaatctctcagtgccacaggtggtgacaatccatgtcactccagtaaatgaccag
cttccaaaagaggctcctggagtttctcggcatttagttgtcaaggaaacggaggtggcc
tacatcactaagaaacatctacattttatagatacagaatcacaagacagggagctgctc
tatacaataaccactcctccatttttctcctccagccgcagacacttagatgctgggaaa
ttgttcatggtggacagcataccaaggctaaccaagactcctgcagctccagggttaaag
tatttcactcagcacgctgtgaaccatatgaaagtggcctacatgccacccatgcaagat
gtaggtccgcatccaagacacgtccagtttgccttttccgtcagtaaccagcacggtggg
acgctatatgggatctgctttaacatcacgattcttccggtggacaatcaggccccaaag
gtgtttaccaaacctctgagagtggctgagggaggtcagtgtgtcatcagcacacagcat
gtcctggtttctgacgaggacaccaaactggacaacatctacctctccttgcagagtcca
cctcagcatggaatggtggagctaaatggattccctctaaacaaagggaccacgtttcct
tggggagacctccaggccttaaaacttagatatcagcataatggatccgaggaacttcag
gatgacatagtactgcaggtcacagatggcacaaatgcagctgaatatgtcctacacgtt
gaggtgttccctgtaaatgacgagccaccagtgctaaaggcggacctcattcccatgatg
cattgctccgagggggaagaggttgtcatcacttctgaatacatttttgctactgatgtg
gacagtgatgatttaaagctgatattcatgattgttggagaacctcagcatgggaccgta
aggagagctggggtcacagtacgtcagttctctcaggaagatgttgtcgcaggggctgtg
acgtacaagcacacaggtggtgagattggcctgatgccttgtttcgacaccattacattg
gtggtttcggacagagaagctggtccttttgtgaatggctgctgttacaatggacctcat
ccatctgttcctcttcatgagtcctttccaatgtatgatctcaacatcacagtgtatcca
gtggataaccaaccgccttcagttgccataggtaccacattcattgtagatgagggcttc
tcagcagcccttactgttaaccatctgtctgccactgatcctgacactgcagcagatgac
ttggaatttgttttggtttctcctccccagtttggctaccttgaaaacacactcccttct
gcaggttttgaaaagagcaatatgggcatcagcatagcttcgtttcagtggaaagacatg
aaggctttacatattaactatgtgcagtccaggcatctggggatggaaccaacggctgac
aagtttgtgttgtatgtcactgatgggaagcaacgctccatggagataccattttacatt
ataatcaacgctacaaatgatgaagctcctgattttatagtgcagaatattactgtgtgt
gagggtcagatgagagagctggattcttccatcatcagtgctactgaccgggacattccc
aagaaccccttgctgttcagtatcacccacaaaccgcgtcatggcctcctcatcaacagg
gcatttagcagaaacttttttcaatataagcaactagccaaccctggccagaagcatgaa
cttgtctacaacttttccatggaacttctcaagaatggaatgaggttgatgtatgtgcat
gatgattcagagagtcttgctgatgactttacaatccaggtgtcagatgggaaacataag
atacttaaaaccatttttgtagaggtcaccccagttaatgatgagaaaccaatgctgagc
aagaaggctgaaattacaataaatatgggcgaaactcgtattatttctagtgctgttctc
tcagccatagatgaagactcacccagggagaagatttactatatatttgaaagaattccc
caaaatgggcaacttcaacttaagatagggagggactgggtccctctgtaccctggcatg
aaatgcactcaggaagaagtggatttgaacttgctgagatatacacacaccggggccatg
gactccaagaaccaagacagcttcaccttccgcctctgggacggtgacaacaggtcaccg
gcatttgactgccacatcaccatcaagaacatggggaaaggtgatattgtcatcctggca
aaaccacttgtggtgtctaaaggtgacagaggtttcctgacgaccaccactctccttgct
gtggatggaacagacaagcccgaggaacttctctacgtcatcacctccccgccgcaattt
ggccaggttgagtacgtccgctatcctggggtccccattacaagcttcagccaaatggat
atagcaggacagacagtctgctatgtagataagagcacgacagctgtccacagagacacg
ttcagattcatcgtcagcaatggacttcagaccaagcctggggtttttgagatcacactg
gcgactgtggacacagccttacccgtggtgaccaggaacaaggggttgagactggttgaa
ggggccacgggcctgctctcccctgacctcctgcagttgactgaccctgacactccagcc
gagaagctcacctttcttctggcccagctcccacggcatggccagctctacctgcggggg
atggcgctgatcccacacaatttcactcagctggacgtggacagtgggcatgtggcctat
cggcacttgggaggggattcttggactgaccacttcacttttgtggccacagatgggacg
aaccatggctttcttgtggatgggagagtgtggcaagaacctgtatcattcaccatccag
gtggaccagttggacaaagcggccccccgcgtcacacacttgcattccccttctcaagta
gggctcttgaaaaatggttgttacgggatttacatcacctcccgcgtgttgaaggcatca
gaccccgacactgatgataatcagatcatctttaagattttacgaggcccccaacatggg
catctggagaactcaacgacaggtgaatttatccatgagaaatttagccagaaggattta
aacagtaagaccattctttacatcataaacccatctttggaagtaaattcagataccatg
gaatttcaagtcatggatcccacagggaactctgccactcctcaaagtttggaactgaat
tggtctcatattgagtggtcgcggactgaatatgaggtctgtgagaatatgggcatgcta
cccttggagattaccagaaggggatattccatggattcagcctttgtgactgtacaggtc
aaccaagtgtcagctacagttggaaaggatttcaccatgactccatctaagctggtgcag
tttgacccaggaatgtcaactaagatgtggaatatagcaattacctatgacggattagag
gaagatgatgaggtctttgaagtaattctgaactcccccgtgaatgcggttcttggcaca
aagacaaaaactgcagtgaaaattttggactcaaaaggagggcagtgccatccttcatat
gccttcaattcaaacatgcccagtgcatgggagaagggcatttggcacctgctctcccca
ggggcttcctcacccaccacttctgattcctttcatctggaaagaagaccccttccaact
tccaagcagctagcggtcaccaggggtgacgccctgcgggactttggttctgaagatctt
tctccagtgaagcttaggacccgaggggatggcaaaacagttcctccatcctctgtttat
aaaaatagaacagacatcatctataactatcatggggtgatttccctgaaactggaagat
gacggctccccagctcgcagaaggaaggccaacgtatcctttattagtgagccccaaaag
acaaccaaagtggcagaaccgcctcaagccgataaggaggaatccacaaccggctcacac
ttccccagacaggacccgttgccctcattcccaaagaactgcacactggaattaaaggga
ctcttccactttgaagaaagcctccaaaaattgtacaagtgcgatggaattgcctggaga
tcctggagcccccacaccaaggaggtggaagataaatcctgcccagctgggtggcaccat
cattcaggctactgccactccttgatcacagagcagaaaggcacgtggactacagctgcc
caagcttgcagggaacattaccaaggcagccttgtaactgtcatctccaggcagcacatg
agatggctttgggacatcagtggaagaaagccgttttggataggtttgaatgaccaagtg
cgtgctggccactgggagtggattggcggtgaacctgtgaccttcaccaactggaggaga
gggcccccgcaacgttcaaggcatggcaaggactgtgttttggttcaaaggccaggaaaa
tggcacacaaaggactgtaggaagggaaaatctcacagttatgtgtgctccaggaaactc
taa
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