Bison bison bison (American bison): 105001483
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Entry
105001483 CDS
T08726
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105001483 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbis03041
]
105001483 (PRPF40B)
Spliceosome [BR:
bbis03041
]
Complex A
U1 snRNP components
U1 related factors
105001483 (PRPF40B)
Complex B
105001483 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
105001483
NCBI-ProteinID:
XP_010856078
Ensembl:
ENSBBBG00000000351
UniProt:
A0A6P3IP74
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
METSKLQMTLMGLSQLTLDWQKKEQIYRGLRVGMGRKLGFETLPLNFVLLFHPHPSASLL
QKPISARPGFYDFSLPQQSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGL
PPMSQRPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGA
DTASSAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKE
YKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAGKQQQPQALQPQPPQPQPDPPP
VPPGPTLLPTGLLEPEPGGSEDCAVSEAAQPLEQGFLQQPEEGPSSSAGQHQPPQQEEEE
SKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKK
QAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAV
VPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLM
DNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFL
DELHETGQLHSMSTWMELYPAVSTDIRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKI
IKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKE
EARRLRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQ
VLETECQHLHSKGRKHGRKGKKHHRKRSHSPSVSWRGSESGDEELPPPSLRPPKRRRRNP
SESGSEPSSSLDSVESGGAALGGRGSPSSRLLLGSDHGLRKAKKPKKKTKKRRHKSNSPE
SETDPEEKAAKESDEKEPEQDKDRDLRRAELPNRSPAFGIKKEKTGWDTSESELSEGELE
RRRRTLLQQLDDHQ
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttccaaactacagatgactttaatggggctcagccagctgactctggactgg
caaaagaaagaacagatctatcgagggctcagagtgggaatgggtaggaaactgggcttt
gagactcttcctttgaactttgtgctcctttttcatcctcacccctctgcttctcttcta
caaaagcccatctctgcccgtccggggttctatgacttttctctccctcaacagtcggtt
cccgattctggtccccggcccccagcagcgcctgcccccttcccaccggggccccccatg
atgccaccacccttcatgcctcctccaggaatccccccaccttttcctccaatggggctc
cctcccatgagtcagagaccaccagccatcccccccatgccacctggcatcatgccccca
atgctcccaccgatgggggcaccaccaccactcacacagataccaggaatggtacctccc
atgatgccaggaatgctgatgccagcagtgcctgtcaccgcagcgacggctccgggtgcg
gacaccgccagctctgctgtggctgggacaggccctccgagggccctgtggagcgagcat
gtagcccctgacgggcgcatctactactacaacgctgacgacaagcagtccgtgtgggag
aagcccagcgtgctcaagtccaaggcagagctcctgctgtcccagtgtccctggaaagag
tacaagtcggacacaggcaaaccttactactacaacaatcagagtaaggagtcccgctgg
acccggcccaaggacctggatgacctggaggctctagtcaaacaagaggctgcagggaaa
cagcagcagccacaggcactacagccacagcctcctcagcctcagcccgatcccccacct
gtgccgccaggccccaccctgctgcccacaggcctcctagaacctgagcccggtgggagt
gaagattgtgctgtgtcagaggctgcccagcccctggaacaggggttcctgcagcagcca
gaggagggccccagcagttctgctggacagcatcagccaccgcagcaagaggaagaagaa
tcaaaaccggagccggagaggtctggcctcagttggagcaaccgggagaaggcaaagcag
gccttcaaggagctgctgagggacaaggctgtcccctccaatgcttcgtgggaacaggcc
atgaagatggtggtcactgacccccgttacagtgccttgcccaaactgagtgagaaaaag
caggcattcaatgcctacaaagcgcagcgggagaaggaggagaaggaagaggcccggcta
agagccaaggaggccaagcagaccttgcagcatttcctggagcagcatgaacgcatgacc
tccactacccgctaccggcgggcagaacagacctttggggagctggaggtctgggctgtg
gtccctgagagggatcgaaaagaggtttatgatgatgtcctcttcttcctggccaagaag
gagaaggaacaggccaagcagctgcggcgccgcaacatccaggccctgaagagcatccta
gatgggatgagtagtgtcaacttccaaacaacatggtcccaggcccagcagtacctcatg
gataaccccagctttgctcaggaccatcagctgcagaacatggacaaggaagatgcgctg
atctgctttgaggagcacatccgagctttggagagggaggaggaggaggagcgagagcga
gcccgacttcgggagcggcgccagcagcgcaagaaccgggaagccttccagaccttcctg
gatgagctgcacgagacagggcagctgcactccatgtccacctggatggagctgtaccca
gcggtcagcactgatatccgctttgccaacatgctgggccagccgggctccacccctctg
gacttgttcaagttctatgtggaagagttgaaggcacgattccatgatgagaagaagatc
ataaaggacatccttaaggaccggggcttctgcgtggaggtgaacacagccttcgaggac
ttcgcccacgtcataagctttgacaagagggctgctgcgctggatgcaggcaacatcaag
ctgactttcaatagtctgctggagaaagcagaggcgcgcgagagagagcgggagaaggag
gaggcccggcggctgcggcgcagggaagctgccttccgaagcatgctgaggcaggctgtg
cctgctctggagctgggcacggcctgggaagaggtccgtgagcgctttgtgtgcgactca
gcctttgagcagatcaccctggagtcggagcggatccggctctttcgggagttcctgcag
gtactggagacggaatgccagcacctccacagcaaaggccggaaacacggcagaaagggc
aagaagcaccatcgcaagcgttcccactcgccttcagtgagttggcggggctctgagtca
ggagatgaggagctgcccccaccctctctccggccccccaagcggaggcgacggaacccc
tcggagtcaggctctgagccctcttcctcacttgattctgttgaaagtgggggtgctgcc
cttggaggacggggttccccctcctctcgccttctcctcggatcagatcatggtcttcgg
aaagccaagaaaccaaaaaagaaaactaagaagagaagacacaagtcgaatagtcctgag
agcgagacagaccctgaggagaaagctgccaaggagagtgatgagaaagaaccggaacag
gacaaggacagggacctccggcgggcagagctccctaaccgctccccagcctttggaatc
aagaaggagaagacgggctgggacacgtcggaaagcgagctgagtgagggtgagctggaa
agacggcggcggacgctcttgcagcagctggacgaccaccagtga
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integrated database retrieval system
