Bison bison bison (American bison): 105001533
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Entry
105001533 CDS
T08726
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105001533 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbis04040
]
105001533 (SCN8A)
Ion channels [BR:
bbis04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105001533 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Lustrin_cystein
HB_ELP1
Mucin_bdg
Motif
Other DBs
NCBI-GeneID:
105001533
NCBI-ProteinID:
XP_010856159
Ensembl:
ENSBBBG00000021249
UniProt:
A0A6P3IVF4
LinkDB
All DBs
Position
Unknown
AA seq
1991 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTKGF
DWEEYINNKTNFYIVPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEDGAGSPRSSSEI
SKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGMRRKGFRLPDNRIGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDS
LFIPIRARERRSSYSGXSGYSRASRSSRIFPSLRRSVKRNSTVDCNGVVSLIGGPGSHIS
GRLLPEVKIDKAATDDSATTEVEIKKKGPGSLLVSMDQLASYGRKDRINSILSVVTNTLV
EELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLF
MAMEHHPMTPQFEHVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSL
MELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKINQDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVA
WIKLKVHAFMQAHFKQREADEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTSG
IGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDT
SSSEGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRK
TCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLL
KWTAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNESSEIRFEIED
VNNKTECEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPD
EQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQ
MENILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFG
MSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCNLDKEHPG
SGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFY
EIWEKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILF
AFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGH
LARRGFICKKTTSNKLENGGTHREKKESTPSTASLPSYDSVTKPEKEKQQRAEEGRRERA
KRQKEVRESKC
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcggctgctcgcaccaccaggccctgatagtttcaagcctttcacccctgag
tcactggcaaacatcgagaggcgcatcgccgagagcaagctcaagaagccgcccaaggcc
gatggcagtcatcgggaggacgatgaggacagcaagcccaagccaaacagtgacctggag
gcagggaagagtttgcctttcatctatggggacatcccacaaggcttggtcgcggttccc
ctggaggactttgacccatactatttgacgcagaaaacctttgtagtattaaacagaggg
aaaactctcttcagatttagtgccacgcctgccttgtacattttaagtccttttaacctg
ataagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaaccctcctgactggtcgaagaat
gtggagtacacgttcacagggatttatacatttgaatcactagtgaaaatcattgcaaga
ggtttctgcatagatggctttacctttttacgggatccatggaactggttggatttcagt
gtcatcatgatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctccgagctttgaaaactatctctgtaattccaggcctgaagaccatc
gtgggcgccctgattcagtccgtgaagaagctgtcagacgtgatgatcctgacagtgttc
tgcctgagtgtctttgccttgatcggactgcagctcttcatgggaaacctgcgaaacaag
tgtgtggtgtggcccatcaacttcaacgagagctatcttgaaaacggcaccaagggcttt
gattgggaagagtacatcaacaataaaacaaatttctacatagttcctggtatgctggaa
cctttgctctgtgggaacagttctgatgctgggcaatgtccagagggataccagtgtatg
aaggcaggaaggaaccccaactatggttacacgagctttgacactttcagctgggccttc
ttggcattatttcgccttatgacccaggactactgggaaaacttgtatcaattaacctta
cgagcagctgggaaaacgtatatgatcttctttgtcttggtcatctttgtgggttctttc
tatctggtgaacttgatcctggctgtggtggccatggcttatgaagagcagaatcaggca
acactggaggaagcagagcagaaagaggctgaattcaaagcaatgttagagcaacttaag
aagcaacaggaagaagcacaggcggcggcgatggccacttcagcaggaactgtctcagaa
gatgccatagaggaagaaggtgaagacggggcaggctctccccggagctcatctgaaatc
tctaaactgagttccaagagtgccaaggagagacggaaccggagaaaaaagaggaagcaa
aaggagctctctgaaggagaggagaagggggatcctgagaaggtgttcaagtcagaatca
gaagatggtatgaggaggaagggctttcggctcccagacaacagaatagggaggaagttt
tccatcatgaatcagtcactgctcagcattccaggctccccattcctctcccgccacaac
agcaagagcagcatcttcagcttcagggggcccgggcggttccgggacccgggctcggag
aatgagtttgcagacgacgagcacagcacggtggaggagagcgagggccgccgggactcg
ctcttcatccccatccgggcgcgcgagcgccgcagcagctacagtggnnnnagcggctac
agccgggccagccgctcttcgcgcatcttccccagcctgcggcgcagcgtcaagcgcaac
agcacagtggactgcaatggcgtggtgtccctcatcggcggccccggctcccacatcagc
gggcgtctcttgccagaggtgaaaatagataaggcagctactgatgacagtgctacaact
gaggtggaaattaagaagaaaggccctggatctctcttagtttctatggaccaactggct
tcctatggacgaaaggacaggatcaacagtatattgagtgttgttacaaatacactggtg
gaagagctggaagagtctcagaggaagtgcccgccatgctggtataaatttgccaacact
ttcctcatctgggagtgtcacccctactggataaagctgaaggagattgtgaacttgatt
gttatggaccctttcgtggacctggccataaccatctgcatcgtcctgaacaccctgttt
atggcaatggagcaccatcctatgacgccacagtttgaacacgtcttggctgtaggaaat
ctggttttcactggaattttcacagcggaaatgttcctgaagctcatagccatggatccc
tactattatttccaagaaggttggaacatttttgatggatttattgtctccctcagttta
atggaactgagtctagcagacgtggaggggctttcggtgctgcgatctttccgattgctc
cgagtcttcaaattggccaaatcctggcccaccctgaacatgctgatcaagattattgga
aattcagtgggtgccctgggcaacctgacccttgtgctggccattattgtcttcatcttt
gctgtggtggggatgcagctctttggaaagagctacaaagaatgtgtctgcaagatcaac
caggactgtgaactccctcgctggcacatgcatgactttttccattctttcctcattgtc
tttcgagtgttgtgcggggaatggatcgagaccatgtgggactgcatggaggtggctggc
caggccatgtgcctcattgtcttcatgatggtcatggttattggcaacttggtggtactg
aacctgtttctggccttgcttctgagctccttcagtgctgacaacctggcagccacagac
gatgatggagaaatgaacaacctgcaaatctccgtgatccggatcaagaagggcgtggcg
tggatcaaactgaaagtgcacgccttcatgcaggcccatttcaagcagcgcgaggctgac
gaagtgaaacctctggacgagctgtacgagaagaaagccaactgcatcgccaaccacacc
ggcgccgacatccaccggaacggtgacttccagaagaatggcaacggcaccaccagcggc
atcggcagcagcgtggagaagtacatcatcgacgaggaccacatgtccttcatcaacaat
cccaacctgactgtgcgagtgcccatcgccgtcggcgagtccgattttgagaacctaaac
accgaggacgtcagcagcgagtcggatcctgaaggcagcaaagataaactggacgacacc
agctcctctgaaggaagcaccattgacatcaaaccagaagtagaagaagtccctgtggag
cagcctgaggagtacttggatccagatgcctgcttcacggaaggttgtgtccagagattt
aagtgctgccaggtcaacattgaggagggactgggcaagtcttggtggatcctgcggaaa
acctgcttcctcatcgtggagcacaactggttcgagaccttcatcatcttcatgattcta
ctcagcagtggtgccctggccttcgaggacatctacatcgagcagaggaagaccatccgt
accatcctggagtatgctgataaagtcttcacctacatcttcatcctggagatgttgctc
aagtggacagcctacggcttcgtcaagttcttcaccaatgcctggtgctggctggacttc
ctcatcgtggctgtctctttagtcagccttatagctaatgccctgggctactcggaacta
ggtgccataaagtcccttaggaccctaagagctttgagacccttaagagccttatcacga
tttgaagggatgagggtggtggtgaatgccttggtgggcgccatcccctccatcatgaat
gtgctgctggtgtgtctcatcttctggctgattttcagcatcatgggagttaacctgttt
gcgggaaagtaccactattgctttaatgagtcttctgagatccgatttgaaattgaagat
gtcaacaataaaacagagtgcgaaaagctcatggaggggaacaacacagaaatcagatgg
aagaacgtgaagatcaactttgacaatgttggggcaggatatctggcgcttcttcaagtg
gcaacctttaaaggctggatggacatcatgtatgcagccgtagattcccgaaagcctgat
gagcagcctaagtatgaggacaacatctacatgtacatctactttgtcatcttcatcatc
ttcggctccttcttcaccctgaacctgttcattggtgtcatcattgataacttcaatcaa
caaaagaaaaagtttggaggtcaggacatcttcatgaccgaagaacagaagaagtactac
aacgccatgaaaaagctgggctcaaagaaaccacagaagcccatcccccgccctctgaac
aaaatccaagggatcgtctttgattttgtcactcaacaagccttcgacattgttatcatg
atgctcatttgccttaacatggtgacgatgatggtggagacagatactcagagcaagcag
atggagaacatcctctactggatcaacctggtcttcgtcatcttcttcacctgtgagtgt
gtgctcaaaatgtttgccttgcggcactactacttcaccattggctggaacatcttcgac
ttcgtggtggtcatcctctccattgtgggaatgttcctggctgatatcattgagaaatac
tttgtctccccaaccctcttccgagtcatccgattggcccgtattgggcgcatcctgcgt
ctgatcaaaggcgcaaagggaattcgtaccctgctctttgccttaatgatgtccttgcct
gctctgttcaacatcggccttctgctcttcctggtcatgttcatcttctccatctttggg
atgtctaattttgcatacgtgaagcacgaggctggcattgatgacatgttcaactttgag
accttcggcaacagcatgatctgcctctttcagatcaccacgtcggctggttgggacggc
ctcctgctgcccatcctaaaccgcccccctgactgcaatttggataaggaacacccaggg
agtggctttaaaggagactgcgggaacccttcagtgggcatcttcttctttgtgagctac
atcatcatctccttcctgattgtggtgaacatgtacattgccatcatcttggaaaacttc
agcgtagccacagaggaaagcgcagaccctctgagcgaggacgactttgagaccttctat
gagatctgggagaagttcgaccccgatgccacccagttcatcgagtactgtaagctggca
gactttgcagatgccctggagcatcccctccgcgtgcccaagcccaacaccattgagctc
atcgccatggatctgccaatggtcagcggggatcgcatccactgcttggacatccttttt
gccttcaccaagcgggtcctgggagatagtggggagttggacatccttcggcaacagatg
gaggagaggttcgtggcgtccaatccttccaaagtgtcttatgagccaatcacgaccacg
ctgcggcgcaagcaggaagaggtatcagcagtggtcctgcagcgtgcctaccggggacat
ttagccaggcggggcttcatctgcaaaaagacaacttccaataagctggagaatggaggc
acacaccgggagaaaaaagagagcaccccatccacagcctccctcccctcctatgacagt
gtgactaaacctgagaaggagaaacagcaacgggcggaggaaggacgaagggaaagagcc
aaaagacaaaaagaggtcagagaatccaagtgttag
DBGET
integrated database retrieval system
