Bison bison bison (American bison): 105002221
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Entry
105002221 CDS
T08726
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
KO
K06099
cold shock domain protein A
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105002221 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbis03000
]
105002221 (YBX3)
03041 Spliceosome [BR:
bbis03041
]
105002221 (YBX3)
Transcription factors [BR:
bbis03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
105002221 (YBX3)
Spliceosome [BR:
bbis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105002221 (YBX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
105002221
NCBI-ProteinID:
XP_010857064
UniProt:
A0A6P3IXQ1
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MERGPRGRGVLPHPGTGGRPSRRSCRTRARRSRPPERPWLRKLGVLTGGTLGGRCRAVPW
RRIPGCGGERSGSRERGSRWYELYLFVGQILIYLLNPILATKVLGTVKWFNVRNGYGFIN
RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGS
RYAADRRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGLEAPAAAGQFSAARSQPRRPQF
RPQYRRRFPPYHVGQTFDRRSRVFPHPSRMQAGEIGEMKDGVPEGAQLQGPVHRNPTYRA
RYRRGPPRPRPAPAVGEAEDKENQQAANGPNQPPARRGYQRPYNYRRRPRPPNAPSQDGK
ETKAGEAPSENPAPAPEHSSAE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaggtccccggggacgtggggttctcccccaccccgggacgggcggccgccca
tcccgcaggagctgccggaccagggcgcggcgctcccgaccgccggagcgcccctggctt
cgcaagttgggggtcttaactgggggtaccctaggagggcgctgtcgcgcagtcccgtgg
cgacgcatccccgggtgcggaggggaaagaagcggcagtcgggagagaggatccaggtgg
tatgagctttatctctttgtaggtcagatactaatttatctgcttaatcctattttagcc
accaaagtccttggcactgtcaaatggttcaacgtcagaaatggatatggatttataaat
cgaaatgacaccaaagaagatgtatttgtacatcagactgccatcaagaaaaataaccca
cggaaatacctgcgcagtgtaggagatggagaaaccgtagagtttgatgtggttgaagga
gagaagggtgcagaagcagccaacgtgaccggcccggatggcgttccagtggaagggagc
cgatatgctgctgaccggcgccgctacagacgcggctactacggccggcgccgtggaccg
ccccgcaactacgctggggaggaggaggaggaagggagcggcagcagtgaaggactggag
gcccccgccgctgccgggcagttctctgcggcccggagtcagccgcgccgcccccagttc
cgcccccagtaccggcggcgcttcccgccttaccacgtgggacagacctttgaccgccgc
tcccgggtcttcccccatcccagcagaatgcaggccggtgagattggtgagatgaaggat
ggggtcccagaaggagcgcaacttcagggaccagtccatcggaatccgacttaccgcgca
aggtaccggaggggccctcctcgcccacgacctgccccagctgtcggagaggctgaagat
aaggagaatcaacaagcggccaatggtccaaaccagccacctgctcgccgtggataccag
cgcccctataactatcggcgtcgcccccgtccccctaacgctccttcacaggatggcaaa
gagaccaaggcaggtgaagcaccatctgagaaccctgctccagctcccgagcacagcagt
gcagagtaa
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