KEGG   Bison bison bison (American bison): 105002221
Entry
105002221         CDS       T08726                                 
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
  KO
K06099  cold shock domain protein A
Organism
bbis  Bison bison bison (American bison)
Pathway
bbis04530  Tight junction
Brite
KEGG Orthology (KO) [BR:bbis00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    105002221 (YBX3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bbis03000]
    105002221 (YBX3)
   03041 Spliceosome [BR:bbis03041]
    105002221 (YBX3)
Transcription factors [BR:bbis03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, DbpA-like
    105002221 (YBX3)
Spliceosome [BR:bbis03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    105002221 (YBX3)
SSDB
Motif
Pfam: CSD OB_RNB S1CSD-TOTE-2
Other DBs
NCBI-GeneID: 105002221
NCBI-ProteinID: XP_010857064
UniProt: A0A6P3IXQ1
LinkDB
Position
Unknown
AA seq 382 aa
MERGPRGRGVLPHPGTGGRPSRRSCRTRARRSRPPERPWLRKLGVLTGGTLGGRCRAVPW
RRIPGCGGERSGSRERGSRWYELYLFVGQILIYLLNPILATKVLGTVKWFNVRNGYGFIN
RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGS
RYAADRRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGLEAPAAAGQFSAARSQPRRPQF
RPQYRRRFPPYHVGQTFDRRSRVFPHPSRMQAGEIGEMKDGVPEGAQLQGPVHRNPTYRA
RYRRGPPRPRPAPAVGEAEDKENQQAANGPNQPPARRGYQRPYNYRRRPRPPNAPSQDGK
ETKAGEAPSENPAPAPEHSSAE
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggagcgaggtccccggggacgtggggttctcccccaccccgggacgggcggccgccca
tcccgcaggagctgccggaccagggcgcggcgctcccgaccgccggagcgcccctggctt
cgcaagttgggggtcttaactgggggtaccctaggagggcgctgtcgcgcagtcccgtgg
cgacgcatccccgggtgcggaggggaaagaagcggcagtcgggagagaggatccaggtgg
tatgagctttatctctttgtaggtcagatactaatttatctgcttaatcctattttagcc
accaaagtccttggcactgtcaaatggttcaacgtcagaaatggatatggatttataaat
cgaaatgacaccaaagaagatgtatttgtacatcagactgccatcaagaaaaataaccca
cggaaatacctgcgcagtgtaggagatggagaaaccgtagagtttgatgtggttgaagga
gagaagggtgcagaagcagccaacgtgaccggcccggatggcgttccagtggaagggagc
cgatatgctgctgaccggcgccgctacagacgcggctactacggccggcgccgtggaccg
ccccgcaactacgctggggaggaggaggaggaagggagcggcagcagtgaaggactggag
gcccccgccgctgccgggcagttctctgcggcccggagtcagccgcgccgcccccagttc
cgcccccagtaccggcggcgcttcccgccttaccacgtgggacagacctttgaccgccgc
tcccgggtcttcccccatcccagcagaatgcaggccggtgagattggtgagatgaaggat
ggggtcccagaaggagcgcaacttcagggaccagtccatcggaatccgacttaccgcgca
aggtaccggaggggccctcctcgcccacgacctgccccagctgtcggagaggctgaagat
aaggagaatcaacaagcggccaatggtccaaaccagccacctgctcgccgtggataccag
cgcccctataactatcggcgtcgcccccgtccccctaacgctccttcacaggatggcaaa
gagaccaaggcaggtgaagcaccatctgagaaccctgctccagctcccgagcacagcagt
gcagagtaa

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