Bison bison bison (American bison): 105004000
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Entry
105004000 CDS
T08726
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
bbis
Bison bison bison (American bison)
Pathway
bbis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105004000 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbis03400
]
105004000 (LIG3)
Enzymes [BR:
bbis01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105004000 (LIG3)
DNA repair and recombination proteins [BR:
bbis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
105004000 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
zf-PARP
DNA_ligase_A_C
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
105004000
NCBI-ProteinID:
XP_010859795
Ensembl:
ENSBBBG00000003485
UniProt:
A0A6P3J8Q7
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MTLAFKILFPPTLRVLRKKELCLFREHRRPDIRHFGQWSETVFCGHHLLQRRKPVPSFQE
SNLKPRATCLVYLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIGK
VVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEENEKEQISQHI
ADLSSKATSTPKKKAVVQAKLTATGQVASPVKGASFVTNANPRKFSGFSAKPNNSGEAHS
SPTPKTPKTSLSSSKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLQKGSAGDG
FHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNSDDMTRDLEQGDVSETIRVFF
EQSKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKH
DLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGQRRALSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHKV
AHFKDFIPRAFPGGHSMILDSEVLLIDNRTGKPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDVSLMDRPLCERRKLLHDNMVEIPNRIMFSEMKQVTKASDLVDMINRVIQEGLEGLV
LKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
SSQKWCTVTKCAGGHDDATLARLQTELDMVKISKDPSKIPNWLKINKIYYPDFIVPDPKK
AAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATTLPQLKELYQLSKERAAF
AIMAGDEGSSATGGSSGENEGTSGPAVPHKAPRASPKQPPTSAKEAGGKPGGCTSRGGNL
PAAEPSPVRAGVKRKAPDVTPCQAKRRPASKRRGRRAVPTGRR
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgactttggcttttaagatcctcttcccaccaactctccgtgtactcaggaaaaaagaa
ctgtgcctattccgagaacatcgccggcctgacataagacactttggccagtggtcagag
acagttttttgtggacaccacctcctccagagaagaaagcctgttccgtccttccaggaa
agcaacctaaaaccacgtgccacctgccttgtttacttgccagggtcgcatgtgggactc
tgcagtggcccctgtgagatggcagagcaacgcttttgtgtggactacgccaagcgtggc
acggctggctgcaaaaaatgcaaggaaaagattgtcaagggcgtatgccgaatcggcaaa
gtggtgcccaatcccttttcagagtcggggggcgatatgaaagagtggtaccacattaaa
tgcatgtttgagaaactggagcgggcccgggccaccacaaaaaaaattgaggacctcacc
gagctggaaggctgggaagagctggaagagaacgagaaagagcagataagtcagcacatt
gcagatctatcttccaaggcaacaagcacaccaaagaagaaagctgttgtccaggctaag
ttgacagccactggccaggtagcatctccagtgaaaggtgcctcatttgtcaccaatgcc
aatccccggaagttttctggcttttcagccaagcccaacaactctggggaagcccactcc
agccctacccctaagacccctaagacaagtctgtcctcaagcaaatgtgacccgaaacac
aaggattgtctgctgcgtgagtttcggaagttgtgtgccatggtggctgaaaatcctagc
tacaacacgaaaacccagattatccaggacttccttcagaaaggctcagcaggagatggt
ttccacggtgacgtgtacctaacagtgaagctgctgctgccgggtgttattaagagtgtt
tacaacttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcaactca
gatgacatgacacgagacctagagcagggtgacgtgtcagagacaatcagagtcttcttt
gagcagagcaagtctttccctccagctgccaagagcctccttaccatccaggaggtggac
gaattcctcctgcggctctccaagctcaccaaggaggatgagcagcaacaggccctgcag
gatatcgcctccaggtgtacagccaatgaccttaagtgcatcatcaggctgatcaagcat
gacctgaagatgaactcaggggcaaaacacgtgctagatgcgctagaccccaatgcctat
gaagccttcaaagcctcacgcaacctgcaggatgtggtggagcgggtcctccgcaacgag
caggaggtggagaaggagccaggccagagacgagctctgagtgtccaggcctctctgatg
accccagtgcagcccatgctggctgaggcctgcaagtccatcgagtacgccatgaagaag
tgtccaaacggcatgttctctgagatcaagtatgacggggagcgagtccaggtgcataag
aagggggaccacttcagctacttcagccgcagtctcaagcccgtcctgccacacaaggtg
gcccactttaaggacttcatcccccgggctttccctgggggccacagcatgatcttggac
tctgaggtgctcctgatcgacaacaggacaggcaaaccactgccctttgggaccctggga
gtgcacaagaaagctgccttccaggatgccaatgtctgcctgtttgtttttgattgtatc
tacttcaatgatgtcagcttgatggataggcctctgtgtgagcggcggaagcttcttcat
gacaacatggtggagattcccaaccggatcatgttctcagaaatgaaacaagtcacaaaa
gcttccgacttggtggacatgatcaacagggtgatccaagaggggctggaagggctggtg
ctgaaggacgtgaagggaacatatgagcctggaaagcgtcattggctgaaagtgaagaaa
gactatttgaacgagggtgccatggccgacacagctgacctggtggtgcttggggccttc
tacgggcaagggagcaaaggtggcatgatgtccatcttcctcatgggctgctatgacccg
agcagccagaagtggtgcaccgtcaccaagtgtgcaggaggccacgacgacgcgacgctc
gcccgcctgcagacggaactggacatggtgaagatcagcaaggatcccagcaagataccc
aactggctgaaaatcaataagatctactaccctgacttcatcgttccagacccaaagaaa
gctgccgtgtgggagatcacaggggctgaattctcgaaatctgaggctcacacagctgat
gggatctccatccgattccctcgctgcacccgaatccgtgatgataaggactggaagtcc
gccacgaccctcccccaactcaaggagctgtaccagctgtccaaggagcgcgcggccttc
gccataatggccggagacgaggggagctccgccacagggggcagcagtggggagaacgag
ggcacttcagggccggctgtgcctcacaaggccccaagagcctcccccaagcagcctccc
accagcgccaaggaggctgggggcaagccgggcggctgcaccagcagaggtggcaacctg
ccagctgcagagccctcccctgtgagagcgggagtgaaacggaaggctcctgatgtgacc
ccgtgccaagccaagaggcggccagccagcaagcggagaggaaggagagctgtgcccaca
ggcaggagatag
DBGET
integrated database retrieval system
