Bison bison bison (American bison): 105004765 Help Entry 105004765         CDS       T08726                                  Symbol SMARCC1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism bbis  Bison bison bison (American bison) Pathway bbis03082   ATP-dependent chromatin remodeling bbis04714   Thermogenesis bbis05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:bbis00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     105004765 (SMARCC1)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     105004765 (SMARCC1)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     105004765 (SMARCC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bbis03021]     105004765 (SMARCC1)    03036 Chromosome and associated proteins [BR:bbis03036]     105004765 (SMARCC1) Transcription machinery [BR:bbis03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      105004765 (SMARCC1) Chromosome and associated proteins [BR:bbis03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     105004765 (SMARCC1)    PBAF complex     105004765 (SMARCC1)    GBAF(ncBAF) complex     105004765 (SMARCC1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 BRCT_2 Chromo DUF919 Motif Other DBs NCBI-GeneID:  105004765 NCBI-ProteinID:  XP_010860798 Ensembl:  ENSBBBG00000015717 UniProt:  A0A6P3J2L6 LinkDB All DBs Position Unknown AA seq 1181 aa AA seqDB search MSSEYDCSRLQEGLRASGDRCRFPPGVWVPLLARDTRNALSSRTISHQLLSPRRWQTVTQ NHRADVDYITIQRRSRGTSHRHGSPSCEVQRVIGPRCRRNRRVEGARPSPARVLRMRARV PSSVRAPVPRRGGAGLPRRKRYVHTDAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKL PAKCFMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLLQSNC LARPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHVYPYPSSQEDEEWLRPVMR KDKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEED YEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSG KKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGT VADLDEQDEETVTTGGKEDEDPGKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIH VIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMR VHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQIPAAQQMLN FPEKNKEKPIDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNK VSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLAS VVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAG TGPDEPEKLEGAEEEKMETDTDAQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEV SEDTKSEEKEAEENKELTDSCKERESDVGKKKVEHEISEGNVATAAAAALASAATKAKHL AAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHM EQLKYAELRARQQMEQQQHGPNPQQAHQHSGGPGLAQLGAAGHPGMMPHQQPPPYPLMHH QMPPPHPPPPGQIPGPGSMMPGQPMPGRMMPTVAASIHPPGSGPTPPGMPPIPGNILGPR VPLTAPNGMYPPPPQQQPPPPAPADGGPPPPAPGPPASAAP NT seq 3546 nt NT seq  +upstreamnt  +downstreamnt atgtcgagcgagtatgattgttcaagactgcaagaaggtctgagggcaagcggggacagg tgcagattcccacccggcgtgtgggttcccctgctggcacgcgacactcgaaacgcgctc tcttctcggaccatctcacaccagctcctttctccccggcggtggcagacggtgacacag aaccaccgtgcagatgtagactacataacgattcaacgcaggtcccggggaaccagccac aggcacggaagcccaagctgtgaggtgcagcgggtaatcggtccgcggtgcaggcggaac aggcgggtagagggggctcgtcctagcccggcgcgagtgctgcgcatgcgtgcgcgcgtg ccctcgtcggttagggcgccggtcccgagaagaggcggggccgggcttccgcgccggaag aggtatgttcacacagatgctcctaccaataaaacactggctgggctggtggtacagctt cttcagttccaggaagatgcctttgggaagcatgtcaccaacccggccttcaccaagctc ccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcacattcttggggct gcttacaaatacaaaaatgaacagggatggcggaggtttgatctgcagaacccatcccga atggatcgtaatgttgaaatgtttatgaacattgaaaaaacattgcttcagagcaattgt ctggccagacccaacatctacctcattccagacattgatctgaagttggctaacaaattg aaagatataatcaaacgacatcagggaacatttactgatgagaagtcaaaagcttcccac cacgtttatccatatccttcctcccaagaggatgaagagtggttgagacctgtgatgaga aaagacaagcaggtgttagtacactgggggttttaccctgacagctatgatacttgggtc catagtaatgatgttgatgcagaaattgaagatccaccgattccagaaaaaccatggaag gttcatgcaaaatggattttggacactgatgttttcaatgaatggatgaatgaggaggat tatgaggtggatgagaacaggaagcccgtgagttttcgtcagcgaatttcaacaaagaat gaagagccagtcagaagtccagagagaagagatagaaaagcatcagctaatgctcgaaag aggaaacattcaccttcccctccgccccccacacccacagaatcccggaagaagagtggg aagaaaggccaagctagtctttatgggaagcggagaagtcagaaagaggaagatgagcag gaagatcttaccaaggacatggaagacccaacacctgtacccaacatagaggaagtggtt cttccaaaaaatgtaaacccaaagaaagatagtgaaaatacacctgttaaaggaggaact gtggccgatctagatgagcaggatgaagaaacagtcacgacaggcggaaaggaagatgaa gatcctggcaaaggtgatcagagtagatccgttgaccctggtgaagataatgtgactgag cagaccaatcacattattattcctagctatgcatcgtggtttgattataactgtattcat gtgattgaacggcgtgctcttcctgagtttttcaatggaaaaaacaaatccaagaccccg gagatatacttggcatatcgaaatttcatgattgacacataccgcctaaatccccaagaa tatttaaccagcactgcttgtcggaggaacttaactggagatgtgtgtgctgtgatgagg gttcatgcctttttagaacagtgggggcttgttaattaccaagtggatccagaaagtcga cccatggcaatggggcctcctccaactcctcatttcaatgtgttagctgataccccctcg gggcttgttcctctacatcttcgatcacctcagattcctgctgctcagcagatgttaaat tttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggtcttcgtactgac atctactccaagaaaaccttagcaaagagtaaaggtgctagtgctggaagagaatggacc gaacaggagactctgctgctcttggaggctctggagatgtataaggatgattggaacaaa gtgtcagagcacgttggaagtcgcactcaggatgaatgcatccttcacttcttgaggctt cccattgaggacccataccttgagaattctgatgcttccctggggcccctggcctaccag cctgtccccttcagtcagtcaggaaacccagtcatgagcactgttgcttttctggcatct gtggtggatcctcgtgtggcgtctgctgcagccaaagcagctttggaggagttttctcgg gtccgggaggaggtgcccctggaattggtggaggctcatgtcaagaaagttcaagaagca gcccgagcctccggaaaggtggatcccacctacggcctggagagcagctgcattgcaggc acggggccagatgagccagagaagctggaaggagctgaagaggaaaaaatggaaacagat actgatgctcagcagcctgaaaaggcagaaaacaaaggggaaaatgaaactgatgaaggt gataaagcacaagacggagaaaatgaaaaaaacagtgaaaaggaacaggatagtgaagtt agtgaggataccaaatcagaagaaaaggaggctgaagagaacaaggaactcactgattct tgtaaagaaagagaaagtgatgttgggaagaagaaagtagaacatgaaatttctgaagga aacgtagccacagccgcagcagctgctcttgcctcagctgcaacgaaagccaagcacctg gctgccgtggaagagaggaagatcaagtctctggtagctcttctggttgagacacaaatg aagaaactggagattaaacttcgacattttgaagaactagaaactatcatggacagagag aaagaagctttagaacaacagaggcagcagttgcttacggagcgccagaacttccacatg gagcagctgaaatatgctgagttgcgagcccgacagcaaatggaacagcagcagcatggg ccgaaccctcaacaggcacaccagcactcaggaggacccggcctggcgcagctgggagca gcaggacatcctggcatgatgcctcatcaacagccccctccctaccctctgatgcaccac cagatgccaccgcctcatccacccccgccaggtcagataccaggcccaggttccatgatg cctgggcagcccatgccaggccgcatgatgcccaccgttgcagccagcatccacccccct gggagtggccccacccctcctggtatgcctccaatcccaggaaacatcttaggaccccgg gtacccctcacggcacctaacggcatgtatccccctccaccgcagcagcagccaccacct ccagcacctgcggacggaggccctccgcctcctgctcctggcccaccagcctctgccgcg ccctag

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