Borreliella burgdorferi JD1: BbuJD1_0504
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Entry
BbuJD1_0504 CDS
T02081
Name
(GenBank) conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bbj
Borreliella burgdorferi JD1
Pathway
bbj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BbuJD1_0504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbj03019
]
BbuJD1_0504
Messenger RNA biogenesis [BR:
bbj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BbuJD1_0504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
KH_PNO1_2nd
KH_2
KH_NusA_2nd
HDOD
Motif
Other DBs
NCBI-ProteinID:
ADQ30571
LinkDB
All DBs
Position
509031..510563
Genome browser
AA seq
510 aa
AA seq
DB search
MIYIIFSSIFAGFILGFLVRVFLGRLSLLDLEKNLKKVRVESQLEIENERRQIIANAKSQ
MLKEKNQQDRDIRDRKNEIVNLEKRLLQREETLDKRISALDKQQSRVDFKIKEFEQKEKV
LREKEADLVKRLENISGLTREDARKIVIEKVEHESKRDAQVIINKSEQEAQLLADKVAKD
ILVSTMQRIVTEVSSEFTVASVELPNDEMKGRIIGKEGRNIRALETLIGADIIIDDTPEA
VVISCFDPIRKELAKRTLERLVTDGRIHPARIEEVVYNVTNEINSIIQEEGEKVVFDLNI
HGLDKRLIRGLGRLYFRSSYGQNVLSHSKETAIIGEILAKEMKLDPVVVKRACLLHDIGK
GMESISDNSEGHAITGAELAQSCGESEIVVNAIAAHHNEVKPESLEAIVVQIADAISASR
PGARRESLNNYINRLKRLEDIAYSFEGVQKCYAIQAGREVRIIVDNALINDEKSILLARD
IAKKIEAEMRYPGKIKVTIIRETRVIEYAR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgatatatattattttttcttctatttttgctggctttatattaggatttttggtaaga
gtttttttaggtagattgtctttattagatttagaaaaaaatctgaaaaaagtaagagta
gaatcacaattagagatagaaaatgaaagaaggcaaattattgctaatgcaaaatctcaa
atgcttaaagaaaaaaaccagcaagatagggatataagagatcggaaaaatgagattgtt
aatttagaaaaaagattattacaaagagaagaaaccttagataagagaatatctgctctt
gacaaacagcagtctagagttgattttaaaattaaagaatttgaacaaaaagaaaaagta
ctaagagaaaaagaggccgatcttgttaaaagattggaaaatatttctggtcttacaaga
gaagatgcaagaaaaattgtaattgaaaaagttgagcatgagtccaaaagagatgctcaa
gttattatcaataaaagtgagcaggaagcacagctattagcagataaggttgcaaaagat
attttagtatctactatgcagcgtattgttacggaggtgagttctgagtttacagtggct
tctgttgagctacctaatgatgagatgaaaggtaggattataggcaaagaagggcgcaat
attagggctcttgagactttaataggagcagatatcattattgatgatacgcctgaagct
gttgttatatcttgctttgatccaataagaaaagagcttgccaagaggactttagaaagg
cttgttacagatggcagaattcatcctgctaggattgaagaagttgtgtataatgttacc
aatgagataaatagcattattcaagaagagggtgagaaggtggtttttgaccttaatata
catgggcttgataagagacttattagggggttgggaaggctttactttagaagcagttat
ggtcaaaatgttttaagccactctaaagaaacggctataataggagaaattttggctaaa
gagatgaaattagatcctgttgtagtaaaaagagcatgccttttgcatgatattgggaaa
gggatggaaagtatttctgataatagcgagggacatgctattactggtgctgaacttgct
caaagttgcggagagagcgaaattgttgttaatgctattgctgcgcatcacaatgaggtg
aagcccgagagtcttgaggctattgtggttcaaatagcagatgccatttcagcatctcgt
cctggagcaagaagggaaagtttaaataactatataaatagacttaaaagacttgaagac
attgcgtatagttttgagggtgttcaaaaatgttatgctattcaggcaggtcgtgaagtt
agaattattgttgacaatgctttaattaatgatgaaaagtcaattttacttgcaagagat
attgctaagaagatagaagctgaaatgagatatcctggaaaaattaaagttacaattatt
cgtgaaaccagagttattgaatatgcaagatag
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