Borreliella burgdorferi JD1: BbuJD1_0632
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Entry
BbuJD1_0632 CDS
T02081
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bbj
Borreliella burgdorferi JD1
Pathway
bbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BbuJD1_0632 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbj03400
]
BbuJD1_0632 (recD)
Enzymes [BR:
bbj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BbuJD1_0632 (recD)
DNA repair and recombination proteins [BR:
bbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BbuJD1_0632 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
Viral_helicase1
PIF1
UvrD_C_2
Helicase_RecD
SLFN-g3_helicase
AAA_22
AAA_5
T2SSE
AAA_16
NPHP3_N
RNA_helicase
SH3_13
RsgA_GTPase
AAA_24
DEAD
AAA
AAA_28
FtsJ
SRP54
Zeta_toxin
PSDC
DUF3349
Motif
Other DBs
NCBI-ProteinID:
ADQ30903
LinkDB
All DBs
Position
complement(662898..664730)
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AA seq
610 aa
AA seq
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MRDFLVLREFLKDKNKKFLTPELKLYEIIELLNINKKNCYKAQTLARSTNNENIVIFLIF
LFNYFDKGHLRADINLLAKDIQNTIIFTKDNLEKTNKSYNKLIKILKGLETFGNLETIKN
IVLLLKKNNILMEFNKLKITTPLILENNIYIYTQKNYREEEELIKQIIKRLENHKSELND
NKIQNIISNLNTNNLNKEQITSVRKALKSNFFLLSGGPGTGKTTTVNYILKAINKTLNNK
KKGLVAITAPTGKASLRLQTSIDYSFKNLEIECNTIQKLLGIKFINKKNLYDEENQLNFD
VIIIDEASMVDAHTFLKLLKATPITTKLIMVGDKNQLPSVNEGNVYSSLLGIQKINSDNV
EDLKENFRSNKEINLLSKAIYKEDSTLICKYINNNKNIQLKEIEKINLKKDLIEYTNNLY
RKIPTFNLKLLKESKIETILETLLENIILSSKNFGKFGTKTLNEIIKTYLKKTYGSFIGQ
IIMITKTDYKNKLFNGERGVIFNENSKFYALFQRKDEKYKKINLDLLTNYEFSFATTIHK
SQGSEYKHIKVILENNPFLTKELMYTAITRAKDSLEIISNKETIIKLSKKSSKRDSKILE
HVNSFKEIDK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagagattttttagtattaagagaatttttaaaagataaaaacaaaaaattcttaacc
cccgagcttaaactttatgaaataattgaacttttaaatatcaataaaaaaaattgttat
aaagcacaaacacttgcaaggtccacaaacaatgaaaatattgtaatatttttaatattt
ttatttaactactttgataaaggccatttaagagctgacataaatctattagcaaaagat
attcaaaatacaataatattcacaaaagacaacctagaaaaaaccaataaaagttacaac
aaattaataaaaatactaaaagggctagaaacatttggaaatctagaaactattaagaat
atagttttacttttaaagaaaaacaacatactaatggaatttaacaagcttaaaattaca
actcccctaatcctggaaaacaatatttacatttatactcaaaaaaactacagagaagaa
gaagaattaataaaacaaattataaaaagattagaaaaccataaaagcgaattaaatgac
aataaaatacaaaatataatatcaaatttaaataccaataatttaaataaagagcaaatt
acatcagtgagaaaggcattaaaaagcaacttctttctattaagcggaggcccgggaaca
ggcaaaacaacaactgttaactatatcttaaaagcaattaataaaacattaaacaataaa
aaaaaaggattagtagccattacagcacctacaggaaaagctagcctaaggctgcaaaca
agtatcgactattcattcaaaaatttagaaatagaatgtaatacaatccaaaaactattg
ggaatcaaattcataaacaaaaaaaatctatatgatgaagaaaatcaattaaattttgac
gtaataataattgacgaagcttcaatggtagatgcacatacttttttaaaactactgaaa
gcaactccaataaccactaagttaataatggtaggagataaaaatcaactcccgtcagta
aacgaaggaaatgtatattcaagtcttttgggaatacaaaaaataaatagcgataatgta
gaagatcttaaagaaaatttcagaagcaacaaagaaataaatttactctcaaaggcaata
tacaaagaagatagtactttgatttgcaaatacattaataataataaaaatattcaactg
aaagaaatagaaaaaataaacttaaaaaaagatctaatagaatatacaaacaatttatac
agaaaaatacccacttttaatcttaaattactaaaagaatcaaaaattgaaacaatactt
gaaactttacttgaaaatataattttaagttcaaaaaattttggcaaatttggaactaaa
acactaaatgaaataataaaaacttacctgaaaaagacctatggaagctttattggccaa
ataataatgataactaaaactgactataaaaataaattatttaatggagaacggggtgtt
atttttaatgaaaattctaaattttatgctttattccaaagaaaagatgaaaaatataaa
aaaataaatttagatttactaacaaattatgaattcagttttgccacaacaatacataaa
agccaaggatctgaatacaaacatataaaagtaatattagaaaataacccttttttgaca
aaagaacttatgtatactgcaataacaagagccaaggatagcttagaaataatttctaac
aaagagactattattaagttaagcaaaaaatctagcaaaagagattcaaaaatactagaa
cacgtaaactcatttaaagaaattgacaaataa
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