KEGG   Bartonella bacilliformis: BARBAKC583_0009
Entry
BARBAKC583_0009   CDS       T00456                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bbk  Bartonella bacilliformis
Pathway
bbk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BARBAKC583_0009 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbk03021]
    BARBAKC583_0009 (rho)
   03019 Messenger RNA biogenesis [BR:bbk03019]
    BARBAKC583_0009 (rho)
Transcription machinery [BR:bbk03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BARBAKC583_0009 (rho)
Messenger RNA biogenesis [BR:bbk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BARBAKC583_0009 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 OB_RNB S1CSD-TOTE-2 AAA_22 NACHT
Other DBs
NCBI-ProteinID: ABM45342
UniProt: A1UQU5
LinkDB
Position
9401..10666
AA seq 421 aa
MQEMKLQELKSKSPVELISFAETLEVENASLMRKQELMFAILKKLALQDVEIIGEGVVEV
LQDGFGFLRSADANYLPGPDDIYILPSQIQSFSLKTGDTVEGPIRGPKEGEHYFALLKVN
KINFEDPEKIRYKIHFDNLTPLYPNEPFRMEIQDPTEKDISSRIVDLISPLGKGQRGLIV
APPRTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAI
RHVRVAEMVIEKAKRLVEYGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVSDKRIFPA
MDVLKSGTRKEDLLVARQDLHKIFVLRRILAPMNITDAMEFLIDKLKHTKNNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaagaaatgaaactacaagaacttaaaagtaaaagccctgttgagcttatctctttt
gccgaaacactggaagttgaaaacgcttcactgatgcgtaaacaagaattgatgttcgcc
atcttgaaaaagctcgctttgcaagacgtagaaattattggggagggcgttgttgaagtt
ttacaagatggatttggatttttacgatctgctgatgctaattatcttccagggcctgat
gatatttatattttaccctcacaaattcaatctttttctctaaaaacaggggatactgtt
gaaggccctatacgcggtccgaaagagggagaacattattttgctctccttaaagtgaat
aaaataaattttgaagatcctgagaaaattcgctataaaattcattttgacaatcttaca
cctctttatccaaatgagcctttccgaatggaaattcaagatcctacggaaaaggatata
tcatcacgaattgttgatttaatatctccactaggaaaaggtcagcgaggattgattgta
gctcctcctagaacaggaaaaacagttttattacaaaatatagctcattctattacaact
aatcaccctgaatgttatcttattgttcttttgattgatgaacgtccggaagaagttaca
gatatgcagcgttctgtaaagggagaagtggtttcttctacctttgatgaaccggcaata
cgtcatgtacgtgtagctgaaatggttattgaaaaagctaagcgtttggttgaatatggg
cgtgatgttgttattcttcttgattcaattacccgtcttgggcgagcgtacaacaccgtt
gttccttcatcaggaaaggttttgacaggtggtgttgatgccaatgctttgcaacgtcca
aagcgcttttttggtgcagcacgtaatatcgaagaaggtggatctttaactattattgcg
acagccctaattgatacgggtagtcgtatggatgaagttatttttgaagaatttaaagga
acagggaattcggaaattgttcttgatcgtaaggtttctgacaaacgtattttcccagct
atggatgttttaaagtcaggaacgcgtaaagaagatcttttagtagcacgtcaagatttg
cataaaattttcgtacttcgtcgtattttagctccgatgaatataacagatgcaatggaa
tttttgattgataaattgaaacatacaaaaaataatagtgaattctttgattcaatgaat
acttag

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