Bartonella bacilliformis: BARBAKC583_0872
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Entry
BARBAKC583_0872 CDS
T00456
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bbk
Bartonella bacilliformis
Pathway
bbk03030
DNA replication
bbk03430
Mismatch repair
bbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BARBAKC583_0872 (dnaE)
03430 Mismatch repair
BARBAKC583_0872 (dnaE)
03440 Homologous recombination
BARBAKC583_0872 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbk03032
]
BARBAKC583_0872 (dnaE)
03400 DNA repair and recombination proteins [BR:
bbk03400
]
BARBAKC583_0872 (dnaE)
Enzymes [BR:
bbk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BARBAKC583_0872 (dnaE)
DNA replication proteins [BR:
bbk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BARBAKC583_0872 (dnaE)
DNA repair and recombination proteins [BR:
bbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BARBAKC583_0872 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABM45514
UniProt:
A1UT56
LinkDB
All DBs
Position
complement(894474..897959)
Genome browser
AA seq
1161 aa
AA seq
DB search
MLEEKGIALNKKDTLPRFIHLRVHSAYSLLEGAIKIPQIVQHAVSDNAPAIAITDTNNLF
GALEFSQYCFAEGIQPIIGCQIAIDFGDKDDHSRLAKYHYPSDFPSVVLFAASKTGYACL
VRLVSRAYLDEHNTNFPHIKADWLLSQSEGIIALTGGSGGPINLALAEDKKEWAIERLMD
LKRIFGDRLYIELQRHGSYDRKVEAELIDLAYVHQIPLVATNEAFFLNKKGYEAHDALMA
VAEGQVVSNPNRKRVTPDHYLKSQDEMVTLFSDLPEALENSVEIALRCHAFTPMRSPILP
RFTERSVDSNAALEEDKELINQAKDGLKIRLETIGLAEGYTLADYEQRLDYEIAVITRMQ
FSGYFLIVSDFIKWAKLHGIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPDR
ISMPDFDIDFCQDRREEVIHYVQKKYGCDQVAQIITFGKLQARAVLRDVGRVLEVPYRQV
DYLTKLVSATPGNNIELAQAIKDEPKFAEEAKKEPVIGRMLDIALQLEGLYRHASTHAAG
IVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKTLTVLKMAVDFVAR
KGVKIDLSCISLNDEETYAMLARGNTVGVFQVESPGMRKALIGMKPDCIEDIIALVALYR
PGPMENIPTYNARKHGQEKITSIHPKIDHLVKETQGVIVYQEQVMQIAQELSGYSLGEAD
LLRRAMGKKIHKEMQKQRTRFVSGAVDRGIDKDQADMIFDLLAKFADYGFNKSHAAAYAI
VSYQTAYMKAHYPVEFLAASMTYDMMNADKLNDFRREALRLEIQVIAPCVQTSHRIFEIG
ENCIYYSLSAIKGVGDSVVDHIVACRGNKPFKDLEDFCGRIDPRVINKRAMESLIYAGAF
DCFGIAREVLLASLETLNARAIRIFDNNSSGQTDIFGMVDGPKEPFILSQATPWSLAEKL
HHEFQVIGFYFSAHPLDEYQTILAKKRVQTWNNFSNAVKGGATAARLAGTVVTKQIRKTK
SGKKIGIIQFSDTSGQYETVMFSEGLVAYEEMLEPGKSFIITVSAENRSEGISLRLETAQ
SLEEEAVQHHKMMRLFINTVDILSQIEQNLNSGGNGEVGIVLIQENGSREVEVLLPKRYK
VSLNVARAIKTLHGVLDVELN
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
gtgctagaagaaaaaggaatcgcactaaataagaaagatactcttcctcgttttattcat
ctgagagtacattcagcttattcactacttgaaggagctataaaaatcccacagattgtt
cagcacgcggtttctgataatgcaccagcaatagctattacggatacgaataatttgttt
ggtgcattagagttttcacaatattgttttgctgagggtatccaacctattatcggatgt
cagattgctattgattttggtgataaagatgatcattcacgtttagctaaatatcactat
ccttcggattttccttctgtcgtgctatttgctgccagcaaaacaggttatgcttgtttg
gttcgtcttgtgagccgcgcttatcttgatgagcataacactaatttccctcatattaaa
gctgattggctattatcacaaagtgaaggcattattgctttgactggtggctcaggtggt
cccattaatttggctttagcagaagataagaaagagtgggccattgagcgcttaatggat
ttgaagaggatttttggtgatcgtctttatattgaattacaacgtcatggttcttacgat
cgaaaagttgaagctgagcttattgatttggcttacgtgcatcagattcctcttgttgca
acgaatgaagctttttttcttaataaaaaaggatatgaagctcacgatgcactgatggca
gttgcggaaggacaagttgtttctaatccgaatcgcaaacgtgtaacaccggatcattat
ttaaaatcacaagatgaaatggttacgttattttctgatcttccagaagctttagaaaat
agcgttgaaattgcgttacgttgtcatgcttttacaccaatgcgaagtccaattttgcct
cgttttacagagcgatctgtagattcaaatgctgcgctagaagaagataaagaattgata
aatcaggcaaaagatggtttgaaaatccgccttgaaacaattggtttagctgaaggctat
acacttgcagattatgagcagcggcttgattatgagattgcagttattacacgtatgcag
ttttctggttattttcttattgtttctgacttcataaaatgggcaaaacttcatggtatt
cctgttggtcctggtcgcggttctggtgctggttcactcgttgcttatgcactcactatt
acggatgttgatccgttgcgcttttctctgttatttgaacgttttctcaatccagatcgt
atttctatgccggattttgatattgatttttgccaagatcgacgtgaagaggttattcat
tatgttcagaaaaaatatggttgcgatcaagtagctcagatcattacatttggtaaatta
caggcacgtgcagtgttacgtgatgttggtcgtgttttggaagtgccttatcgtcaggtc
gattatcttacaaagttagtttctgctacacctggaaataatattgaattagcacaggct
attaaagatgaaccaaaatttgcagaagaagcaaaaaaagagcctgttattgggcgtatg
ttggatatagctttgcagcttgaaggactttatcgtcacgcatcaactcatgctgcagga
atcgttattggtgatcgacctttatcagaattggtaccgatgtatcgtgatccgcgctca
gatatgccagttacccaatttaacatgaaatatgttgaacaagctgggttagtgaaattt
gattttcttggtttaaaaacccttactgttctaaaaatggctgtagattttgttgcacgg
aagggtgtaaaaatagatttatcgtgtatttctcttaatgatgaagagacttatgccatg
ttagcacgtggtaatacagtgggagtatttcaagttgaaagtcctggtatgcgtaaagcg
cttattgggatgaaaccagattgtattgaagatattattgcgcttgtagcgctttatcgc
cctggtccgatggagaatattccaacatataatgcacgtaaacacgggcaagaaaaaatc
acttctattcatcctaaaatagatcatttagttaaagaaacacaaggcgttattgtttat
caagaacaagttatgcaaattgctcaagagctttctggttattcacttggggaagcagat
ttattacgccgagctatggggaaaaagatccataaagaaatgcaaaaacagcgtacgcgc
tttgtgagtggagctgttgatcgtggtattgataaggatcaagctgacatgatctttgat
cttttagcgaaatttgcagattatggttttaataaatcgcatgctgctgcttacgcaatc
gtctcatatcaaacagcttatatgaaagcacattatccggttgagtttttggctgcctct
atgacatatgatatgatgaatgccgataaattaaatgattttcggcgtgaagcattaaga
ctagaaattcaagttattgcaccttgtgtgcaaacatcgcatcgcatttttgaaattgga
gaaaattgcatatattattctctttccgctattaaaggggtaggagattcagtggtcgat
cacattgttgcttgccgtgggaataaaccttttaaggatttagaagatttttgtgggcgt
attgatcctcgtgttattaataagcgtgcgatggaaagtttgatttatgctggtgccttt
gattgttttggtattgcccgtgaggttttattagcaagccttgaaactctcaatgcgcgt
gctattcgcatttttgataacaattctagtgggcagactgatatattcgggatggtggat
gggccaaaagagccttttattttatcacaggcaactccttggtctttagcagaaaaactt
catcatgaatttcaggttataggtttttatttttctgctcatccattggatgaataccaa
actattcttgctaaaaaacgcgttcagacttggaataatttttctaatgcagttaaaggt
ggagcaacagctgctcgtcttgctggaactgttgtgacaaaacaaattcgtaaaacaaaa
tctggtaaaaaaatagggattatccagttttctgatacaagtgggcagtatgaaacggtt
atgttttctgaggggcttgttgcctatgaagaaatgctagaacctggaaaatcttttatc
attacagtgagtgcagagaaccgttccgaaggaattagtttacgtcttgagacagctcaa
tccttagaagaagaagcggtacaacatcataaaatgatgcgcctttttataaacacagtc
gatatactttcacaaattgaacaaaatttaaattccggtggtaatggagaagtaggaatt
gttttgattcaagaaaatggatcacgagaagtagaagtcttacttcctaagcgatataag
gtgagcttaaatgtagcgcgtgctataaaaacgcttcacggtgttcttgatgtagagttg
aactaa
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