Bartonella bacilliformis: BARBAKC583_0874
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Entry
BARBAKC583_0874 CDS
T00456
Name
(GenBank) DEAD/DEAH box helicase domain/helicase conserved C-terminal domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bbk
Bartonella bacilliformis
Pathway
bbk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BARBAKC583_0874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbk03019
]
BARBAKC583_0874
Enzymes [BR:
bbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BARBAKC583_0874
Messenger RNA biogenesis [BR:
bbk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BARBAKC583_0874
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
ABM44539
UniProt:
A1UT58
LinkDB
All DBs
Position
complement(901154..902569)
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AA seq
471 aa
AA seq
DB search
MEIKLKKDFILNVDRENVFTKLGLSTLLIKNLLNAGISEPKPIQEQAIPVMLKGRDILGI
AQTGSGKTLAFGLPILSQILTFGDKRSPKTARALILVPTRELAVQIEEMISAVVKGAHLS
TCLIVGGVSRFKQIKRMGAGVDVVIATPGRLMDLVREKFVDLSRSRFLVLDEADRMLDMG
FINDVRRIAKLLCKEHQTALFSATMPKEIKELANGLLNEPVKIEVVPQGTTAVEITQKLY
CVPKNEKRNILNRLLVNPDLISVIVFIRTKHGADAITRYLKNMGHAVATIHGNKSQNARQ
SALKAFREGSVKVLVATDIAARGIDIPGVSHVINYDLPEDAESYVHRIGRTGRNGASGDA
ITLFDEESEESRLRAVERIIRMKLTRENVPLQYETYPEKPFTLESDEKENSKERRFKKSK
SYKQTSNRSDRAVKLHTRESSSNKSEKHEKAKATAKRAKSFRFRKSVKKVA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggagattaagctaaagaaagattttattttgaacgtagatagagaaaatgtttttaca
aaattgggtttgtcgactcttttaattaaaaatttattgaatgctggaatcagtgagcct
aagcctatccaagaacaggctattccagttatgttgaaagggcgtgatattttaggtatt
gcgcagaccggttctggaaaaacattggcatttggtctccctatcttaagtcagattttg
acttttggtgataagcgctctcctaagactgcacgtgctttgattttggttcctactcgt
gagcttgctgttcagattgaagaaatgataagtgctgttgtgaaaggcgctcatctttca
acatgtttaattgtgggtggagtgtcgcgttttaaacaaattaaacgtatgggagctggt
gtggatgttgtgattgcaacaccagggcgtttaatggaccttgttcgcgaaaaatttgtt
gatctttctcggtctcgttttttggtgttagatgaagctgatcgtatgttggatatgggc
tttattaacgatgtacggcgtatcgccaaacttttatgtaaagagcaccaaacagcactt
ttttctgcaacaatgccaaaggaaattaaagaacttgccaatggtttgcttaatgaacca
gtgaaaatagaggtcgttcctcagggaactaccgctgtagaaattacccaaaaactatat
tgtgtccctaaaaatgaaaaaagaaatattttaaataggcttttggtcaatccagatttg
atttccgttattgtttttatacgaaccaaacatggtgctgatgctattacacgttattta
aaaaatatgggacatgctgttgcaacgattcatggcaataaatcacaaaatgctcggcaa
tctgcattgaaagcttttcgcgaaggatccgtgaaggttctcgttgcaaccgatattgca
gctcgtggtattgatataccaggtgtcagccacgttattaattatgatttaccagaggat
gctgaaagttatgtgcatcgtattggccgtacagggcgcaatggtgcttctggtgatgct
attacgctttttgatgaagagtcagaggagtcacgtttacgtgctgtagagcgcataatt
cgtatgaagttaacgcgtgaaaatgttcctttacaatatgaaacatatccagaaaagcca
tttacgctagaaagtgatgagaaagagaatagtaaagaacggcgttttaaaaaatctaaa
agttataagcagacttctaatcgctcagatagggctgtaaagttacatacaagagagtct
tcatctaataaaagtgaaaaacatgaaaaagcaaaagcgactgcaaaacgtgctaagtct
tttcgttttcgcaaatcagtgaagaaggtagcttaa
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