Bartonella bacilliformis: BARBAKC583_0900
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Entry
BARBAKC583_0900 CDS
T00456
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bbk
Bartonella bacilliformis
Pathway
bbk03410
Base excision repair
bbk03430
Mismatch repair
bbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BARBAKC583_0900 (recJ)
03430 Mismatch repair
BARBAKC583_0900 (recJ)
03440 Homologous recombination
BARBAKC583_0900 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbk03400
]
BARBAKC583_0900 (recJ)
DNA repair and recombination proteins [BR:
bbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BARBAKC583_0900 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BARBAKC583_0900 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BARBAKC583_0900 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
CDC45
FmrO
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
ABM44513
UniProt:
A1UT82
LinkDB
All DBs
Position
complement(928224..930008)
Genome browser
AA seq
594 aa
AA seq
DB search
MQLSHYCLDVKSSACGQAWVDSLDIQGINKARAISQKFGLPDQLARVLSARDVDESEVIS
FINPALRTLMPNPEHFTDMQCAAERLVKAIMNQENVAIFGDYDVDGACSSALLARFFRYF
GIETKTYIPDRIVEGYGPNAQAMKALVQEGASLIITVDCGANSPEAIKVARLLGADVVVL
DHHQMGDLHQEAVALVNPNRPDDFSEQGHLCAAGVVFITLAWVNHLLREKKWEGDIPDLL
AMLDLVALATICDVVPLKGVNRAFVVKGLQVARSMHNPGIAALAKVARIGEPLNSFHLGF
LLGPRINAGGRIGDQALGARLLSCDNRDEADRIAKQLDQLNQERQEMESVQLAQAEAYIH
SIYQDEEMPLSIVVAHQEWHPGIVGILASRLKERFFCPVFAIALKADGKGIGSGRSIDGI
DLGELVREAVSLNLLEKGGGHSMAAGLTIQSTKINAFQEWLKEKVSLMVSQLRAEQCLNI
DGFISASGANKDLFDMIEKAGPFGSGNATPVFVLPSHRLVNLHEVGKGHLRLTVSDIEGK
KLQGIAFRAVETSLGDFLVKNIDKTIHLAGNLSLNYWNGTITPQLRVIDAAAVD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcaattatctcattattgtcttgatgttaaatcttctgcttgtggtcaagcttgggtg
gattctcttgatattcagggaatcaataaagctcgtgctatttctcaaaaattcggcttg
ccagatcaattagctcgggttctttcggcaagagatgttgatgaatctgaagttatttct
tttattaatccagcgttacgcactttaatgcctaatccagagcattttacggatatgcaa
tgtgctgcagagcgtttggttaaagctattatgaatcaagaaaatgtcgctattttcggt
gattatgatgttgatggtgcctgttcatcagcgctgttggcacgtttttttcgttatttt
ggtatagaaacaaaaacttatattcctgatcgtatcgttgaaggttatgggccgaatgca
caagccatgaaagcgttagtacaagaaggagctagtttaattattactgttgactgtggt
gcaaacagtccggaggcaataaaagtcgctagacttttaggtgctgatgtggtggtttta
gatcatcatcaaatgggcgatcttcatcaagaagctgtcgctcttgttaatcctaatcgc
cctgatgatttttcagaacaagggcacttatgtgctgcaggtgtcgtatttattacatta
gcatgggtcaatcatttattgagagagaaaaaatgggaaggagatattcctgatctttta
gctatgcttgatctcgttgcgttagcgaccatatgtgatgtagttccattaaaaggcgtt
aatcgtgcttttgttgttaaagggcttcaagttgcgcgttctatgcataatcctgggata
gccgctttagcgaaagtcgcacgtataggtgagccgcttaatagttttcatttaggtttt
ttgttaggacctagaattaatgcaggtggacgtattggagatcaggcgttaggagcacgt
ttgcttagctgtgataatagagatgaagctgatagaatagcaaagcaattggatcagctt
aatcaagagcgacaagagatggaaagcgttcaattagctcaggcagaagcttatattcat
tctatttatcaagatgaagaaatgcctttatcaattgttgttgctcatcaagaatggcat
cctggaattgttggtattcttgcatctcgtttaaaagagcgttttttttgtcctgttttt
gcaattgctttaaaagcagatggcaaaggtattggatcaggacgctccattgacggcata
gatttaggagaacttgttcgtgaagcggtttctctaaatttattagaaaaaggcggaggg
catagtatggccgctggacttacaatccaatcaacaaaaatcaatgcctttcaagagtgg
ctaaaagaaaaagtttctttaatggtttcacagttgcgtgctgagcagtgtctcaacata
gatggttttatttctgcttctggtgctaataaggatctttttgatatgattgaaaaagca
ggtccatttggttcaggaaatgctacacctgtctttgttcttccttctcatcggttggtt
aatcttcacgaagtggggaaaggtcacttgcgtcttactgtttctgatattgaagggaaa
aaactgcaaggaatagcttttcgtgcagtagaaacatcacttggtgattttcttgttaaa
aatatcgataaaacgatccatttggctggtaatctcagtttaaattactggaatggaacg
attactccgcaactgcgggttattgatgcagcagcagtagattaa
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integrated database retrieval system
