Bartonella bacilliformis: BARBAKC583_0932
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Entry
BARBAKC583_0932 CDS
T00456
Name
(GenBank) putative DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbk
Bartonella bacilliformis
Pathway
bbk03420
Nucleotide excision repair
bbk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BARBAKC583_0932
03430 Mismatch repair
BARBAKC583_0932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbk03400
]
BARBAKC583_0932
Enzymes [BR:
bbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BARBAKC583_0932
DNA repair and recombination proteins [BR:
bbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BARBAKC583_0932
MMR (mismatch excision repair)
Other MMR factors
BARBAKC583_0932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_11
Tudor_1_RapA
DUF3553
Motif
Other DBs
NCBI-ProteinID:
ABM44743
UniProt:
A1UTB0
LinkDB
All DBs
Position
956624..959074
Genome browser
AA seq
816 aa
AA seq
DB search
MNDFSNHIPFFDDEEPLYRSEDNSETGNAIEAKEQIQYESDYLKKLNPEQQQAVINTEGP
ILVLAGAGTGKTRVLTTRIAHILHLGLAYPRQILAVTFTNKAANEMKIRIGELVGKTVEG
MPWLGTFHSTGVKILRRHAELVDLKSNFTILDNDDVLRLLKQLIQAENLDDKRWPARSLA
MMIDSWKNQGLSPEHISESDAHSFGNGVGRKLYHSYQNRLKSLNACDFGDLLLHPIHIFQ
HNPDILREYQDKFRYILVDEYQDTNTAQYLWLRLLAQSSTKSQVNLCCVGDDDQSIYGWR
GAKIDNILRFEKDFPPAKIIRLERNYRSTSHILKTASHLISHNQGRLGKTLFSDQSNNEE
TKVKIHAAWDSEEESRAIGKEIEQTQQSGHSLNQIAILVRASFQMREFEDRFVALGLNYR
VIGGPRFYERMEIRDAMAYLRVVVQPADDLAFERILNTPKRGLGNAALRHLYNSARARAI
PLFAAAAEIIETDDLKPKACSALRSVIENFHRWQDMLKHTPHTELAETILDDSGYIAMWQ
EDRSPEAPTRLENLKEMIRSMEKFEDLHSFLEHVSLVMDADSNENMDAVNIMTLHSAKGL
EFDTVFLPGWEEGLFPHQRSLDEGGRLGLEEERRLAYVGITRAKKHLHIWFVSNRRIHGL
WQSTLPSRFLDELPEQHIEVADIETSYGGYGQPRFRKQDPFHNNYSTPGWQRAQQNQTEA
TRNNWGRRSNVNTQQINYGDNDLGFGLTHPRQTKNIEKQTTTKSVSNIPSTFVINDRVFH
IKFGYGHILAIEDNKLTISFEKAGEKRVLDNFVTKA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttttccaatcatataccatttttcgatgatgaagagcctctttacaggtct
gaagataattctgagacaggtaatgctatagaagcaaaagaacaaatacaatacgaatcc
gactatttgaaaaagcttaacccagaacagcaacaagcagttataaatacagagggacct
attttagttcttgcaggtgctggtactggaaaaacccgtgttctcacaactcgcattgct
catattttgcatctcggccttgcctaccccagacaaatacttgctgttactttcaccaat
aaagcagcaaatgaaatgaaaattcgtattggtgaacttgtcgggaaaactgttgagggt
atgccttggcttggaacatttcattcaactggtgtaaaaattttgcgtcgccatgcagaa
ctggttgatttaaaaagcaacttcacaatccttgataatgatgatgtacttcgtcttctg
aaacagctcattcaagctgaaaacttagatgacaaacgttggccagcgcgtagccttgca
atgatgattgattcttggaaaaatcaaggactttcaccagaacatatttcagaaagcgac
gctcactctttcggtaatggtgtaggacgtaagctttatcacagctatcaaaaccggtta
aaaagtctcaatgcctgtgactttggtgatcttttgctgcaccctatccacatatttcaa
cataatccagatattcttcgtgaataccaagataagtttcgctatattcttgtagatgaa
tatcaagatacaaatacagcacaatatctttggcttcgccttttagctcaaagctctaca
aaatcacaagtcaatctctgttgtgttggcgatgatgaccaatccatttacggatggcgt
ggtgctaaaattgataatatattgcgctttgaaaaggattttcctcctgcaaaaatcatt
cgtctagaacgtaactatcgttccacatcgcatattctaaaaaccgcttctcatcttatt
tctcataatcaaggaagattaggaaaaacactattttctgaccaaagcaataacgaagaa
acaaaggtaaaaattcatgcagcatgggattcagaggaagaatctcgtgctattgggaaa
gaaatagaacaaacacaacaaagtggacattccttaaatcagatagctatcttggtaaga
gcatcatttcaaatgcgcgaatttgaagatcgttttgttgcactcggtcttaattatcgt
gttattggtggtccacgcttttatgaacgaatggaaatacgagatgctatggcttatctg
cgtgttgtcgttcaaccagctgatgatttagcctttgagcgcattctgaatacacctaaa
cgtggtttaggaaatgcagcgctacgccatctttacaatagtgcacgtgcacgcgctatc
cccctttttgcagcagctgctgaaattattgaaacagacgatctaaaacccaaagcatgc
agtgccttgcgaagcgttattgaaaatttccatcgctggcaagatatgctaaaacacaca
ccacatacagaacttgctgaaacaattcttgatgattcaggctatatagccatgtggcaa
gaagatcgttctccagaagcaccaacacgattagaaaatctgaaagaaatgatccgctct
atggaaaaatttgaagatcttcatagcttcttagaacatgtttcactcgttatggatgcc
gatagcaatgaaaatatggatgccgttaatatcatgacccttcattcagctaaggggctt
gaatttgatacagtctttcttcctggttgggaggaaggactctttcctcatcaacgctca
ttagatgaaggtggtcgtttaggactggaagaagagcggcggcttgcttatgtaggcata
acaagagcaaaaaaacatttgcatatatggtttgtatccaatcgacgcattcatggactt
tggcaatctacgcttccttctcgttttcttgatgaattacctgaacaacatatagaagta
gcagatattgaaacatcttatggtggttatggccaaccgcgctttagaaagcaggaccct
tttcacaataattattcaacaccagggtggcagcgtgcacaacaaaaccaaacagaagca
acacgcaataattggggaagacgatcaaatgttaacacacaacaaatcaattatggtgat
aatgatttaggttttgggctcacccatcctcgtcagacaaaaaatattgaaaaacaaacc
accactaaatcagtatcgaatataccatcaacttttgtcattaatgatcgagtttttcat
ataaagtttggttatggtcatattttagcaatagaggataataaactaaccatttcattt
gaaaaagctggagagaaacgtgttctcgacaattttgttaccaaagcttaa
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