Bartonella bacilliformis: BARBAKC583_0966
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Entry
BARBAKC583_0966 CDS
T00456
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bbk
Bartonella bacilliformis
Pathway
bbk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BARBAKC583_0966 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbk03021
]
BARBAKC583_0966 (rpoD)
Transcription machinery [BR:
bbk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BARBAKC583_0966 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Med21
DUF713
CC2-LZ
Motif
Other DBs
NCBI-ProteinID:
ABM44477
UniProt:
A1UTE2
LinkDB
All DBs
Position
complement(997353..999353)
Genome browser
AA seq
666 aa
AA seq
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MAKVKKKDNLEVMGQGSLDNAPLDFSDDAIKKMIKLAKKNGYVTMDELNAVLPSDEVTSE
QIEDILMMFSEMGVNVVDDEDEIEAEHYEGEITVEGGDLVEATSREVATIPKREATDRTD
DPVRMYLREMGAVELLSREGEIAIAKRIEAGRETMISGLCESPLTFQALIIWREELREQR
ILLREIIDLEMTYAGPEAKQAPIIERSEVEKIKKEASPSDKDDVDIIAEDIGAEDDEDDE
VNLSFAAMENELYPQIMETLNFIAETYVKLRKLQNQHVESSLAACKASDLSSAQKKKSTQ
LKSDLIQAVKSLSLNQNRIEALVEQLYDINKRLVHNEGKLKRIANSYGIGHEDFLKEYQG
RELDSDWVNYIATLPGSGWKEFSTREVEVIRNLRSEIQNLAQETAISIGEFRRIVTQVQK
GEREATIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKF
STYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQILHEIGREPTPEELSSKL
SMPLEKVQKVLKIAKEPISLETPVGDEDDSHLGDFIEDRNALLPIDAAIQANLRDTTTRV
LASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKL
RSFLDS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggttaaaaagaaagacaatctagaagtaatgggtcaaggaagcttagacaat
gctcctcttgatttttccgatgacgccatcaaaaaaatgataaagcttgccaaaaaaaat
ggctacgtaacaatggatgaattaaatgcggttcttccctctgatgaagttacatccgaa
caaattgaagatatattgatgatgttttctgagatgggtgttaacgttgtagacgatgaa
gatgaaatagaagctgagcattatgaaggggaaattacggtagaaggtggtgatttggta
gaggccactagccgtgaagttgcgacgatacctaaacgtgaagcaacagatagaacagac
gatccggtgcgtatgtatttgcgtgaaatgggagcagttgagcttctttctcgtgaaggg
gaaattgccattgctaagcgcattgaggcaggacgtgaaacaatgatttcggggctttgt
gaaagtcctttaacatttcaggcgcttattatttggcgtgaagaattgagagaacagcgt
atccttcttcgtgaaattattgatcttgaaatgacttacgctggaccagaagccaagcaa
gccccaattattgagcggagtgaagtagaaaaaattaaaaaagaagcatccccgtctgat
aaagatgacgtggacattattgcagaggatataggtgctgaagatgatgaagatgatgag
gttaatttgtcatttgcagcaatggaaaatgaattatatcctcagattatggaaactttg
aactttattgctgaaacttatgtcaaattgaggaaattgcaaaatcagcatgttgaaagt
agtttagctgcttgtaaagcaagtgatctctcttctgctcaaaagaagaaatctactcaa
ttgaaatctgatttgattcaagcagtaaaatctctttccctgaaccaaaatcgtattgaa
gccttagttgaacaactgtatgatattaataaaaggttggttcataatgagggtaaatta
aagcggattgcgaatagttatggaattgggcacgaagattttctaaaagaatatcaaggc
cgtgaattggattcagattgggttaattatattgcaactttaccaggatctggttggaaa
gaattttcaactcgtgaagttgaggtcattcgtaatttgcgtagtgagatacaaaatctt
gcgcaagaaactgctatttcgataggagagtttcgtcggattgttacccaagtacaaaag
ggtgagcgcgaagcgacgattgctaaaaaagaaatggtagaagcgaatttgcgtcttgtt
atttcaattgcaaaaaaatacacaaaccgtggtttgcagtttcttgatcttattcaggaa
ggtaatatcggtttgatgaaggccgttgacaaatttgaatatcggcgtggatataagttt
tcaacttatgcaacatggtggattcgtcaagcaattacgcgttcaattgctgaccaggca
cgtaccattcgtattcctgttcatatgattgaaactattaacaaaattgttcgtacatcg
cgccaaattttacatgaaattgggcgcgaacctacaccagaagaattatccagtaaactt
tctatgcctttagaaaaagtgcaaaaagttcttaaaattgcgaaagagcctatttcactt
gaaacgcctgttggtgatgaagatgattctcatttaggggatttcattgaggatagaaat
gctttattgccaattgatgcagctattcaggctaatttgcgtgatacaacaactcgcgta
ctcgcttcattaacgccacgtgaagagcgtgttttaagaatgcgttttggtattgggatg
aatactgatcatacgttagaagaagttggtcagcaattttcagtcacacgtgagcgtatc
cgtcagattgaagcaaaagcacttcgtaaattgaagcatcctagtcgttcacgtaaattg
cgtagttttcttgattcataa
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