Bartonella bacilliformis: BARBAKC583_1256
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Entry
BARBAKC583_1256 CDS
T00456
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bbk
Bartonella bacilliformis
Brite
KEGG Orthology (KO) [BR:
bbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbk03016
]
BARBAKC583_1256 (truB)
Enzymes [BR:
bbk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BARBAKC583_1256 (truB)
Transfer RNA biogenesis [BR:
bbk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BARBAKC583_1256 (truB)
Prokaryotic type
BARBAKC583_1256 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF4714
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABM45296
UniProt:
A1UU52
LinkDB
All DBs
Position
1300529..1301491
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AA seq
320 aa
AA seq
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MSRQSKKKGRSISGWVILDKPKAMKSTEAVSKIKRLFNAQKAGHAGTLDPLASGLLPIAL
GEATKTVPYVMEGTKTYHFHVAWGEERSTDDLEGVVTKTSSKRPTQEEIFALLPKYTGVI
LQTPPQFSAIKIAGNRAYDLAREGEIFEIPPRQVKIDSLELIGTTDQGYSIFEMTCGKGT
YVRSLARDMGHDLGCYGYIADLRRTAVAPFCENDLITWDALKAAIPHENTTDENCIPLKQ
NFSTLDGLLIETDVALKCLAHYTLNQIQAQRVRMGNSILLCDQNMPTSNIDICVTYKAQL
LAIGTIDQNQFKPKRIFTTL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggcaatctaaaaaaaaaggtcgttctatttctggctgggttattcttgataaa
ccaaaagcaatgaaatcaacagaagccgtctcaaaaatcaaacggctctttaatgcacaa
aaagcaggacatgcaggaacacttgatccgcttgcttctggtttactccctattgcattg
ggagaagcaaccaaaactgttccttatgttatggaaggaacaaaaacctaccattttcat
gtagcttggggagaagaacgctctacagatgatctagaaggagtggtgactaaaacatcc
tctaaacgaccaacacaggaggaaatctttgctcttttacctaaatatacgggtgttatt
ttgcaaaccccaccacaattctctgcgatcaaaattgccggcaaccgtgcctatgatcta
gcacgtgaaggtgaaattttcgaaattccaccccgccaagtaaaaattgattcccttgaa
ctcattggaacaacagatcaaggatattccatctttgaaatgacatgcggaaaaggaacc
tacgtgcgctccttagcacgcgatatgggacatgatcttggttgttatgggtatattgct
gatttacgccgtactgcagtcgcgcctttttgtgaaaatgatctcattacatgggatgca
ttaaaagctgcaataccacacgaaaacacaacagatgaaaattgtatacctctcaagcaa
aatttctctacacttgatggattattaattgaaacagatgttgcattaaagtgtcttgct
cattatacccttaaccaaattcaagcacagcgtgttagaatgggaaattcaatcctctta
tgtgatcaaaacatgccaacgagtaatattgatatctgtgtaacctataaagcccaactg
cttgctataggcactattgatcaaaatcaattcaagccaaaacgaatttttactacttta
taa
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