Blattabacterium sp. (Blattella germanica) Bge: BLBBGE_180
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Entry
BLBBGE_180 CDS
T00995
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bbl
Blattabacterium sp. (Blattella germanica) Bge
Pathway
bbl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLBBGE_180 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbl03021
]
BLBBGE_180 (rpoC)
03400 DNA repair and recombination proteins [BR:
bbl03400
]
BLBBGE_180 (rpoC)
Enzymes [BR:
bbl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLBBGE_180 (rpoC)
Transcription machinery [BR:
bbl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLBBGE_180 (rpoC)
DNA repair and recombination proteins [BR:
bbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLBBGE_180 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ACY40203
UniProt:
D0JAL5
LinkDB
All DBs
Position
183953..188185
Genome browser
AA seq
1410 aa
AA seq
DB search
MNRKKNNKFNKVTIRLASPEAILKESHGEVLKPETINYRTHKPERDGLFCERIFGPVKDY
ECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHISLVVPVVHIWCFRTSPNKIGYLL
GLPAKKLEMIIYYERYVVIQGGSAFRSDGSSFQKGDFLTEEEYLHILNKLPKGNQQLEDS
DPNKFIAKMGAECIEELLNRIDLDILSSELRNQAHHETSKQRRIEALKRLQVVEAFREGK
NGGTPSWMIIHVLSVIPPELRPLVPLDGGRYAASDMTDLYRRVLIRNNRLKRLIEIKAPE
VILRNEKRMLQEAVDSLFDNSRKVSAVKSEANRPLKSLSDALKGKQGRFRQNLLGKRVDY
SARSVIVVGPHLKLHECGLPKDMAAELYKPFIIRKLIERGIVKTVKSSKKIIDKRDPMIW
DILENVLRGHPILLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCAAFNADFDGDQMAVH
LPLSYGAILEAQLLMLASQNILNPANGSPITVPSQDMVLGLYYMTKPLLSDSKDKVKGEG
LIFYSPEEVVIAYNQRVVDLHALIKVKVNIREEDKFSNRLIETTVGRVLFNQVVPQKVGF
INESLTKKSLREIIGKILYLTDVPTTANFLDDIKELGFYNAFKGGLSFGLGDIIIPDNKK
DMVDYAIKQVDNVKMNYNMGLITNNERYNQVIDIWTNTNAMLTERVMKYMREDRQGFNPV
YMMLDSGARGSKEQIRQLSGMRGLMAKPQKAGSSGGEIIENPIISNFREGLSILEYFIST
HGARKGLADTALKTADAGYLTRRLVDAAQDVIIKMEDCNTLRGLEISALKKNEEIVETLF
DRILGRISLNDVYHPKYDQLIISSGDMIDEKIAKIIDQSGIEMVEVRSPLTCEAKMGICS
KCYGRNLSTGEIVKKGEAVGVIAAQSIGEPGTQLTLRTFHVGGTAGNITESSQIRAKYDG
IVEFEDLKIVKTKKDSEEIGIVVSRSTEMKLFNQKKSSILMINNIPYGASLYVNHGDLLK
TGDMICKWDLYNAVIVAEFSGIISYQHLEQGVTFQVEIDEQTGFQEKVITEVRNKNLVPT
LKILNDKNEELKVYNLPVGAHLMVENEEKIDVGKILVKVPRKSAKSGDITGGLPRLSELF
EARNPSNPAVVSEMDGIVSHGKIKRGNREIIVESKTGEIRKYLVKLSNQILVQENDYVKA
GMPLSDGAVTPNDILNIRGPRAVQEYLVKEIQEVYRLQGVKINDKHFEVIVLQMMRKVEV
IDVGDTKFLEGNIEYKDDFIEENDRIYQMKVVEDSGNSTIFKIGDIINYRDLRNENAVLK
YKNKKLIKTRNAIPATARPILQGITRAALQTKSFISAASFQETTKVLSEAAISSKTDYLY
GLKENVIVGHKIPAGTGLREYENVHPEILQ
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaagaaaaacaacaagtttaataaagtaactattaggttagcttctccagaa
gctatattgaaagaatctcatggagaagtattaaaaccggaaactataaattatcgcact
cataaaccagaaagagatggtcttttttgtgaacggatttttggtccagtgaaagattat
gaatgtgcatgtggaaaatataagagaattcgttataaaggaattgtttgtgatagatgt
ggagttgaagtgaccgaaaaaaaggttagaagagaacgtatggggcatattagtctagtc
gttcctgttgttcatatttggtgttttcgaacttctccaaataaaattggatatttgttg
gggttacctgctaaaaaacttgaaatgattatttattatgaacgatatgttgtcattcaa
ggaggatcagcttttcgttcagatggatcttcttttcaaaaaggtgattttttaactgaa
gaagaatatttacatattttaaacaaacttccaaaaggaaatcaacaattagaagattct
gatccaaataaatttattgctaaaatgggagcagaatgtatagaagagcttctcaatcgt
attgatttagatattttatcatctgaattaagaaatcaagctcaccatgaaacttctaaa
caaagacgcattgaagcattgaaacggttacaagtagtagaagctttcagagaaggaaaa
aatggagggacaccgtcttggatgattattcatgtgttgtctgtcattccccctgaattg
agacccttagttcctttagatggaggtcgttatgctgcttctgatatgacagatttatat
cgtcgtgtacttataagaaataatcgtttaaaaagacttatagaaattaaagctcctgaa
gtcattttaagaaatgaaaaaagaatgcttcaggaagcggtagattctctttttgataat
tcaagaaaagtatctgcagtaaaatcggaagctaatcgtcctttaaaatctttatcagat
gctttaaaagggaaacaaggtcgttttagacaaaatcttcttggtaaaagggtagattat
tctgcaagatcagttattgttgttggtccacatttaaaattacatgagtgtgggcttcct
aaagatatggcagcagaactttataaaccttttattatacgtaaattaatagaaagagga
atagtgaaaactgtcaaatcttccaaaaaaatcattgataaaagagatcctatgatatgg
gatattctagaaaatgttttaagaggacatcctatattattaaatagagctcctacttta
catagattaggaattcaagcttttcaaccaaaattaatagaaggaaaggctattcaattg
catcctttagtttgcgctgcttttaatgcggattttgatggagatcaaatggctgttcat
ttgccattatcatatggtgctattttggaagctcaacttttaatgttggcctctcaaaat
atattaaatcctgctaatggatctccgattacagttccttctcaagatatggtactagga
ttatattatatgacaaagcctttgttatcagattctaaagataaagttaaaggagaagga
cttattttttattcaccagaagaagtagtaatagcatataatcaaagagtagtcgattta
catgctttaattaaggtaaaagtaaatattcgtgaagaagataaattttcgaatagatta
atagaaacgactgtaggtagagtattgttcaatcaagtagttcctcaaaaagtcggattt
attaatgaatctttgacaaagaaatctttaagagaaattataggtaaaattttgtatctt
acagatgttcctactactgctaattttttagatgatattaaagaattaggtttctataat
gcatttaaagggggtctttcttttggattaggagatatcattatccctgataataaaaaa
gacatggttgattatgctatcaaacaggttgataatgtcaaaatgaattataacatggga
ttgataacaaataacgaacgttataatcaagttatagatatatggaccaataccaatgct
atgcttacagaaagagtaatgaaatatatgcgagaagatcgacaaggatttaatcctgta
tatatgatgttggattctggagctagaggatctaaagaacaaatacgtcaactttctgga
atgcgtggattaatggcaaaacctcaaaaagctggatcttctggaggagaaattattgaa
aatcccattatctccaattttagagagggactttctattttggaatattttatatccact
catggtgctcgtaaaggattagcagatacagcattaaaaacagcagatgctggatatctt
actagacgtttagttgatgcggctcaagatgtgattatcaaaatggaagactgtaatact
ttacgtggtttggaaatatctgcattaaaaaaaaatgaagagatagtagaaactttattt
gatagaattttaggtcgtatatctttaaatgatgtttatcacccaaaatacgatcaattg
ataatctcttctggggatatgatagacgaaaaaatagcaaaaataattgatcaatctgga
attgaaatggtagaggttagatctcctttaacttgtgaagcaaaaatggggatttgttct
aaatgttatggtcgtaatttatcaacaggagaaatagttaaaaaaggagaggcagtagga
gttatagcagctcaatctattggagaaccaggaactcaattaacattgcgtacttttcat
gttgggggaacagcaggtaatattactgaatcttcacaaatcagagctaaatatgatgga
attgtagaattcgaagatttaaaaattgtaaaaacgaaaaaagattctgaggaaatagga
atagtagtttctagatctacagaaatgaaactttttaatcaaaaaaaatcatctattttg
atgattaataacattccttatggagcttccttgtatgtaaatcatggagatctgttaaaa
acaggagatatgatttgtaaatgggatttatataatgcagttattgttgcagagttttcc
ggaattatatcttatcaacatttagaacaaggtgttacttttcaagttgaaatagatgaa
caaactggatttcaagaaaaagtaataacagaagtaagaaataaaaatttagttccaaca
ttaaaaatactgaatgataaaaacgaagaattaaaagtatataatctcccagtgggagct
catttaatggtggaaaatgaagaaaaaatagatgtaggaaaaattttagttaaagttcct
agaaaatctgctaaatctggagatataacagggggattgcctcgtttatctgaattattt
gaagcacgaaatccttctaatccagcagtggtttcagaaatggatggaatagtgagtcat
ggaaaaataaaaagaggaaatagggaaattattgtagaatctaaaacaggagagatcaga
aaatatcttgtcaaattatctaatcaaatacttgttcaagaaaatgattatgtaaaagca
ggaatgcctctatcagatggggccgttactcctaatgatattttaaatataagaggacct
agagctgttcaagaatatttagttaaagaaatacaagaagtctaccgtttgcaaggtgta
aaaataaatgataaacattttgaagttattgttttgcaaatgatgagaaaagtcgaagtt
atagatgtaggtgatactaaatttttagaaggaaatatagaatataaagatgactttata
gaagaaaatgatagaatttatcagatgaaagtagttgaagattctggaaattccactatt
ttcaaaataggtgatattattaattatagagatttgaggaatgaaaatgccgttttaaaa
tacaaaaataaaaaattgataaaaactagaaatgcaattcctgctactgctagaccgata
ttacaaggaataacacgagctgctttgcaaaccaaatcttttatatcagcagcttcattt
caagaaacaacaaaagttttaagtgaagccgcgataagtagcaaaactgattatttatat
ggattgaaagaaaatgtgatagtggggcataaaattcctgcaggaactggattaagagaa
tatgaaaatgttcatccagaaattttgcaataa
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