Bordetella bronchiseptica MO149: BN115_0180
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Entry
BN115_0180 CDS
T02295
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bbm
Bordetella bronchiseptica MO149
Pathway
bbm00300
Lysine biosynthesis
bbm00470
D-Amino acid metabolism
bbm01100
Metabolic pathways
bbm01110
Biosynthesis of secondary metabolites
bbm01120
Microbial metabolism in diverse environments
bbm01230
Biosynthesis of amino acids
Module
bbm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN115_0180 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN115_0180 (dapF)
Enzymes [BR:
bbm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BN115_0180 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CCJ56937
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All DBs
Position
complement(190454..191365)
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AA seq
303 aa
AA seq
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MGDNPCMMWNFTKMHGAGNDFVVLDGVRQDIAMTPERARALADRHFGIGADQILLVEPAT
RADADFRYRIFNADGSEVEHCGNGARCFVRFVHEQGLSARNPLRAEIVTGVIVLDEGEDE
QVTVDMGSTRFDPPSLPFDSTGLSAQTQGQDTVWNLEIDAPAGLPRSVAISTVAISNPHA
VQVVDDVDAAPVGVIGPLVESHPRFARRVNVGFMQVVDRHQIRLRVYERGAGETLACGTG
ACAAVAAGVRRGLLDSPVRVHTRGGMLTVDWNGERLRMTGPAISVFSGQVDIDRLVFTSG
LHR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataatccatgcatgatgtggaacttcaccaaaatgcacggcgcgggcaacgac
ttcgtcgtgctcgatggcgtccgtcaagacatagcgatgacgcccgagcgcgcccgcgcg
ctggccgaccgccatttcggcatcggcgccgaccagatcctgctggtcgaacccgccacg
cgggccgacgccgatttccgctaccgcattttcaacgccgacggcagcgaagtcgaacac
tgcggcaacggcgcgcgctgtttcgtgcgtttcgtgcacgagcaaggcctgtcggcgcgc
aatccgctgcgcgccgagatcgtgaccggcgtcatcgtgctggacgagggcgaagacgag
caggtcaccgtcgacatgggcagcacccgcttcgacccgccgtccctgccgttcgactcc
accggcctgagcgcccagacgcagggccaggatacggtctggaacctggagatcgacgcg
ccggccggcctgccgcgcagcgtggcgatctcgaccgtggccatttccaacccgcacgcc
gtgcaggtggtcgacgatgtcgacgccgcgccggtcggtgtgatcggcccgctggtcgaa
tcgcacccgcgcttcgcgcgccgcgtcaacgtcggcttcatgcaggtcgtcgaccgccac
cagatccgtctgcgcgtctacgaacgcggcgccggcgaaacgctggcctgcggcaccggc
gcctgtgcggccgtcgccgcgggcgtgcggcgcggcctgctcgattcgccggtgcgcgta
cacacgcgcggcggcatgcttaccgtggactggaacggcgagcgcctgcgcatgaccggt
ccggccatttccgttttcagcggccaggtcgacatcgaccgcctggtgttcaccagcggc
ctgcaccgttag
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