Bordetella bronchiseptica MO149: BN115_1990
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Entry
BN115_1990 CDS
T02295
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor 70
KO
K03086
RNA polymerase primary sigma factor
Organism
bbm
Bordetella bronchiseptica MO149
Pathway
bbm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BN115_1990 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbm03021
]
BN115_1990 (rpoD)
Transcription machinery [BR:
bbm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN115_1990 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
MitMem_reg
TMPIT
Motif
Other DBs
NCBI-ProteinID:
CCJ58746
LinkDB
All DBs
Position
2156003..2158171
Genome browser
AA seq
722 aa
AA seq
DB search
MKVAKPAAKTAAKKTATKTVAAKTAAADKPAKTTKARAKKAEDKLADLVGAARPAPSGRR
PGRPAKNANNDSDAFDDSMDGEGEVLPDLKPPKRGGKRGKADPKDLIARGPVSPEEYEAR
RNRLKQLIKLGKDRGYLTYGEINDHLPDDLVDAEAIDGIISTFSDMGIAVYDQAPDAETL
LMSENAPVASNDDDVEDEAEAALTTVDSDFGRTTDPVRMYMREMGSVELLTREGEIEIAK
RIEDGLKHMVMAISACPTTINEILAHITRVREGQAQIDEVVDGLVDPEDGEEYAGAGVTA
DEDEGDDGPAGGMSSKQLEDLRVKALAKFDEVSKQFEKMRQSYEKEGYKSDAYLKAQDII
QTELMGIRFTAKMVEKLADTLRAQVEEVRQLERAVLHTCVDRAGMPRSHFLKAFPGNETN
LQWVLDEVAAAHAYSETLERQIPAVQELQQKLIDLQTRVVLPLKDLKDVNKRMATGEAKA
RKAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYAT
WWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGAEPDPATLAQKMDMPED
KIRKILKIAKEPISMETPIGDDDDSHLGDFIEDTATLAPSDAALHGSMRDVVKEVLDSLT
PREAKVLRMRFGIEMSTDQTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRADKLKSFLE
GQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtcgccaagcccgctgccaagacggccgccaagaagacggccaccaagacggtc
gcggccaagacggctgccgccgacaagccggccaagaccaccaaggcgcgcgccaagaag
gccgaagacaagctggccgacctggtcggcgccgcgcgtccggcgcccagcggccgccgt
cccggccgccccgcgaagaacgccaacaacgatagcgatgctttcgacgactccatggac
ggcgaaggcgaagtgctgcccgacctgaagccgcccaagcgcggcggcaagcgcggcaag
gccgatcccaaggatctgatcgcccgtggccccgtctcgcccgaagaatacgaagcgcgc
cgcaatcgcctcaagcagctgatcaagctgggcaaggaccgcggctacctgacctacggc
gaaatcaacgaccacctgcccgacgacctggtcgacgccgaagcgatcgacggcatcatc
agcaccttcagcgacatggggatcgcggtctatgaccaggcccccgacgccgaaaccctg
ctgatgagcgagaacgcgccggttgcctccaacgacgacgatgtcgaggacgaggccgag
gccgccctcaccaccgtggactccgacttcggccggaccaccgaccccgtgcgcatgtac
atgcgcgaaatgggctcggtcgagctgctcacccgcgaaggcgaaatcgaaatcgccaag
cggatcgaggacggcctcaagcacatggtgatggccatctcggcttgtcccaccaccatc
aacgaaatcctcgcccacatcacgcgcgtgcgtgaaggccaggcccagatcgacgaagtg
gtcgatggcctggtcgaccccgaagacggcgaggaatacgccggcgccggcgtgaccgcc
gacgaggacgaaggcgatgacggcccggccggcggcatgtccagcaagcagctggaagac
ctgcgcgtcaaggccctggccaagttcgacgaggtgagcaagcagttcgagaagatgcgc
cagtcctatgagaaggaaggctataagtcggacgcctatctcaaggcccaggacatcatc
cagaccgaactcatgggcatccgcttcacggccaagatggtcgagaagctggccgacacc
ctgcgcgcccaggtcgaggaagtacgccagctcgaacgcgcggtgctgcatacctgcgtc
gaccgcgccggcatgccgcgctcgcacttcctcaaggccttccccggcaacgagaccaac
ctgcagtgggtgctggacgaagtcgccgccgcccatgcctacagcgaaaccctcgagcgc
cagatcccggccgtacaggaactgcagcagaagctgatcgacctgcagacgcgcgtcgtg
ctgccgctgaaggacctcaaggacgtcaacaagcgcatggccaccggcgaagccaaggcc
cgcaaggccaagcgcgaaatgaccgaggccaacctgcgcctggtgatctccatcgccaag
aagtacaccaaccgtggcctgcagttcctggacctgatccaggaaggcaacatcggcctg
atgaaggcggtggacaagttcgaataccggcgcggctacaagttctcgacctacgccacg
tggtggatccgccaggccattacgcgctccatcgccgaccaggcgcgcaccatccggatt
ccggtccacatgatcgaaacgatcaacaagatgaaccggatcagccgccagatcctgcag
gaaaccggcgccgagccggatcccgcgaccctggcgcagaagatggacatgcccgaggac
aagatccgcaagatcctgaagatcgccaaggagccgatctccatggaaacgcccatcggt
gacgacgacgactcgcacctgggcgatttcatcgaggacaccgccaccctggcgccttcc
gacgcggcgctgcacggctcgatgcgcgatgtggtcaaagaagtgttagactcgctcacc
ccgcgcgaggccaaggtgctgcgcatgcgtttcggcatcgaaatgagcaccgaccagacg
ctggaagaggtgggcaagcagtttgacgtcacgcgcgagcgcatccgtcaaatagaggcc
aaagcgctgcgcaagctgcgccaccccagccgcgccgacaagctgaagagcttcctcgaa
gggcagtaa
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integrated database retrieval system
