Bordetella bronchiseptica MO149: BN115_2286
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Entry
BN115_2286 CDS
T02295
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bbm
Bordetella bronchiseptica MO149
Pathway
bbm02020
Two-component system
bbm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bbm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN115_2286 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BN115_2286 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbm03021
]
BN115_2286 (rpoN)
Transcription machinery [BR:
bbm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN115_2286 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF3208
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CCJ59042
LinkDB
All DBs
Position
complement(2505230..2506678)
Genome browser
AA seq
482 aa
AA seq
DB search
MFPRPGASLSEENLSHVLQDLRLRQQTTLAPRLQQSIHLLQMSALEFTTTVQQALATNPF
LEDADETETQDDAPAPPTASEPPATSEPPPEPPSYAGDYPTRGAAAQPGVASDAAAWVPA
TLSLHERLSQALGAYVLSERDRALAEFIVDGLDDDGYLRQELAQLAGAADFDPPPDASEW
QAALHLVQQLDAPGLAARDLPECLALQIRACSRLDPAVRDAALAIVAAHLSRLARSDYPG
MRRALRCSEPVLRQACGVIRGLDPKPGRRYAHEPPSYVVPDVVVSKQRQQWLVVPNRGAM
PHARLHQAYADLFRRARMDERSPMAQELQEARWLVRNVEQRYATIRRVAEAIVQRQQMFF
EFGQIALRPLMLREVADELEMHESTVSRATANKYMSTPRGVFEFRHFFSRELSTESGGTC
SAAAVRALIREYIDAEDPRMPLSDVTLAERLAGDGIVVARRTVSKYRLQLRLPAADARRQ
YY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgcgccctggcgcgtccctgtcggaggaaaacttgagccacgtcctgcaggat
ctgcggctgcgccagcaaaccacgctggcgccacgcctgcagcagtccattcatctgctg
caaatgtcggcgctggagttcaccacgacggtgcaacaggccctggcgaccaatccgttc
ctggaggacgccgacgaaaccgaaacgcaggacgacgcgccggcgccgcccacggcgtcc
gagccgcccgcgacatccgagccgccgcccgagccgccctcctatgccggcgactatccc
acgcgcggcgccgccgcccagcctggcgtggccagcgacgcggcggcctgggtgccggcc
accctgagcctgcacgaacgcctgtcgcaggcgctgggcgcctacgtgctgagcgaacgc
gaccgtgcgctggccgagttcatcgtggatggactggatgacgacggctacctgcggcag
gaactggcccaattggccggcgccgccgatttcgacccgccgcccgacgccagcgaatgg
caggcggcgctgcacctggtccagcaactcgatgcgccgggcctggccgcgcgcgacctg
cccgaatgcctggccctgcagatccgcgcctgtagccggctcgatccggccgtgcgcgac
gccgccctggccatcgtcgccgcccacctgtcgcgcctggcgcgcagcgattaccccggc
atgcggcgcgcgctgcgctgcagcgaaccggtgctgcgccaggcgtgcggggtgatccgc
ggcctcgaccccaagcccggccgccgctatgcgcacgaaccgcccagctacgtcgtgccg
gatgtggtggtcagcaaacagcgccagcaatggctggtggtgccgaatcggggcgccatg
ccgcatgcccggctgcaccaggcctatgccgacctgttccggcgcgcccgcatggacgag
cgcagcccgatggcgcaggagctgcaggaagcccgctggctggtgcgcaacgtcgagcaa
cgctacgccaccatccggcgcgtggccgaggccatcgtgcagcgccagcagatgttcttc
gagttcggccagatcgcgttgcggccgctgatgctgcgcgaggtggccgacgagctggag
atgcacgagtccacggtctcgcgcgccaccgccaacaagtacatgtccacgccgcgcggg
gtgttcgagttccgccatttcttctcgcgcgaactgagcaccgaatcgggcggcacgtgt
tcggccgcggccgtgcgcgcgctgatccgcgaatacatcgacgcggaagacccgcgcatg
cccttgtcggatgtgaccctggccgaacggctggccggcgacggcatcgtggtggcgcgc
cgcacggtgtccaagtaccggctgcagctgcgcctgcccgccgccgacgcgcgccgccag
tactactga
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