Bordetella bronchiseptica MO149: BN115_2858
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Entry
BN115_2858 CDS
T02295
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbm
Bordetella bronchiseptica MO149
Pathway
bbm03420
Nucleotide excision repair
bbm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN115_2858 (uvrD)
03430 Mismatch repair
BN115_2858 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbm03400
]
BN115_2858 (uvrD)
Enzymes [BR:
bbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BN115_2858 (uvrD)
DNA repair and recombination proteins [BR:
bbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN115_2858 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BN115_2858 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CCJ59614
LinkDB
All DBs
Position
complement(3105754..3108057)
Genome browser
AA seq
767 aa
AA seq
DB search
MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFALLAVTFTN
KAAREMLTRMSTLLPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQAFQILDTTDQLAAIK
RLLKAGNIDDEKYPPRDVQRFINGAKEEGLRPGDVEAYDPHRRKLIEIYQLYEAQCQREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGTGAAIFA
VGDDDQSIYAFRGANVGNMADFERDYAHGRVIRLEQNYRSYGHILDSANALIGHNTGRLG
KNLWTEQGEGEPVRVIEQPSDGMEAQWLVDEIRALINDGRMRSEIAVLYRSNAQSRVLEH
ALFSVGIPYKVYGGLRFFERQEIKHALAYLRLIANPNDDTSWMRVVNFPTRGIGARTLEQ
LSDAARAHDTSLFGAVARVGGKGGSNLAQFAQLIGQMAHDTRELPLPELVDHVIEASGLK
AHYQTEREGAERLENLNELITAATVFAAEENFEGLPAGVVPDHDVSGALMPGVVDAPQPD
TLGGLTPLAAFLSHAALEAGDNQAQVGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHE
NSIMEPAGLEEERRLMYVAITRARERLYLSLAQSRMLHGQTRYAMRSRFLEEIPEQHLKW
LSPRAGLHQGGGFGGAAPAWSSSRGDAFGRKPTGTAAPRQPRGMASGVTVGEQQFRVGQG
VRHARFGDGTIIGLSGSGQDAQAQIQFRDVGAKTLALGIAKLDIITA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggaaaagctcaatcctgaacaacgcgctgcagtaacgctcgaaccgcaacac
gccctggttctcgccggggcgggcagcggcaagacccgcgtactgacgacccggatggcc
tggctgattcaaaccggccaggccagtccatttgcgctgttggcagtcacctttaccaac
aaggcggcgcgtgaaatgctcacgcgcatgtcgaccctgttgccgatcgacacgcgtggc
ctgtggatcggtaccttccacggcctgtgcaaccgcatgctgcgcgcgcaccatcgcgac
gcgggcttgccgcaggcattccagattctcgataccaccgaccagctggccgccatcaag
cgcctgctcaaggcgggcaatatcgacgacgagaagtacccgccgcgcgatgtgcagcgt
ttcatcaacggcgccaaggaagaggggctgcgtcccggcgacgtcgaggcctacgatccg
caccggcgcaagctgatcgagatctaccagctgtacgaggcgcagtgccagcgcgagggc
gtggtcgatttcgccgagctgctgctgcgcgcgtacgagctgctgtcgcgcaacgcgccg
gtgcgcgagcattaccagcggcgcttccgccatatcctggtcgatgagttccaggacacc
aacacgctgcagtacaagtggctgcgtctgctggcgggcaccggggcggcgattttcgcg
gtcggcgacgacgatcagtccatctatgcgtttcgcggcgccaacgtcggcaacatggcc
gacttcgaacgcgactacgcacatggccgtgtcatccgcctggaacagaactaccgctcg
tacggccacatcctggattcggccaatgccctcatcgggcacaacaccggacgcctgggc
aagaacctctggaccgaacagggcgagggcgagccggtgcgcgtcatcgagcagccctcc
gacggcatggaggcgcaatggctggtcgacgagatccgcgcgttgatcaacgacggccgc
atgcgcagcgaaatcgccgtgctctaccgcagcaacgcgcaatcgcgcgtgctcgagcat
gcgctgttctcggtaggcatcccctacaaggtgtacggcggcctgcgcttcttcgagcgc
caggaaatcaagcacgcgctggcctatctgcgcctgatcgccaatccgaacgacgacacc
tcctggatgcgggtggtcaactttccgacccgcggcatcggggcgcgcacgctcgagcag
ctcagcgacgcggcgcgcgcgcacgataccagcctgttcggcgcggtggcccgcgtcggc
ggcaagggtggctcgaatctggcgcaattcgcgcagctgatcggacagatggcgcacgac
acgcgcgagctgccgctgcccgaactggtggaccatgtcatcgaggccagcggcctgaag
gcccactaccagaccgaacgcgaaggcgccgagcgcctggagaacctcaacgaactgatc
accgctgccacggtgttcgcggccgaggaaaacttcgaaggcttgccggccggcgtcgtg
cccgatcacgatgtgagcggcgccctgatgccgggcgtggtcgatgccccgcaacccgat
acgctgggcggcctgacaccgttggcggctttcctgtcgcatgcggcgctggaagccggc
gacaatcaggcgcaggtgggccaggacgcggtgcagctgatgaccgtgcatgccgccaag
ggccttgagttcgacgccgtgttcatcaccggcctggaggaagggctgttcccgcacgag
aacagcatcatggagcccgccggcctcgaggaagagcggcgcctgatgtacgtggcgatc
acgcgggcccgggaaaggctgtatctcagcctggcgcaaagccgcatgctgcacggccag
acgcgttacgccatgcgttcgcgttttctcgaagaaattcccgagcagcacctgaagtgg
ctgagcccgcgcgccggcctgcatcagggcggcggcttcggcggcgcggcgccggcctgg
agcagcagccgcggcgacgcctttggccgcaagcctaccggcactgccgcaccgcggcag
ccgcgtggcatggccagcggcgtcaccgtgggcgagcagcagttccgggtggggcagggc
gtgcgccacgcgcgctttggcgacggcaccatcataggcctcagcggttcgggacaggac
gcccaggcccagatccagtttcgcgacgtgggcgccaagacgctggcgctgggcatcgcc
aagctggacatcatcacggcctga
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integrated database retrieval system
