KEGG   Bordetella bronchiseptica MO149: BN115_3672
Entry
BN115_3672        CDS       T02295                                 
Name
(GenBank) putative ATP-dependent RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
bbm  Bordetella bronchiseptica MO149
Pathway
bbm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BN115_3672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbm03019]
    BN115_3672
Enzymes [BR:bbm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BN115_3672
Messenger RNA biogenesis [BR:bbm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BN115_3672
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: CCJ60428
LinkDB
Position
complement(4017336..4018601)
AA seq 421 aa
MMGAAQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILTPTRELADQVYESVKRY
SLHTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQKNVNLSQVGILVLDEA
DRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSYLNHPVEIEVAARNATAD
TVTQIAYQMHGDTKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAESIHGD
KTQGDRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHRIGRTGR
AGASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELPADLVARSHGRDRDAPRERGADR
HRGERRTSGAAAPRQPVDELFYKPYEPADGQPASPEAPKPEGRSNAPKRQLAVLLGGSRK
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
gtgatgggcgccgcccagaccggcaccggcaagacggcggcattcacgctgccgatcctg
catcgcctgatgccgctggccaataccagcgcatcgccggcgcgccacccggtgcgggcc
ctcattctcacgcccacgcgggagctggccgaccaggtctacgaaagcgtcaagcgctac
agcctgcatacgccgctgcgcagcgccgtggtgttcggcggcgtggacatcggtccgcag
aaggaagccctgcggcgcggttgcgaagtcctggtggccacgccggggcgcctgctcgat
cacgtcgagcagaagaacgtcaacctcagccaggtcggcatcctggtgctcgacgaggcc
gaccgcatgctcgacatgggctttctgcccgatctcgaacgcatcatccgcctgttgccg
gcgcagcgccaggggctgctgttctcggccacgttcagcaatgaaatccgcaagctgggc
cgttcgtacctgaaccacccggtggagatcgaagtcgccgcgcgcaacgccacggccgac
accgtcacgcagatcgcctaccagatgcatggcgataccaagcgggcggcagtggtgcac
ctggtcaagtcgcgcggcctgaagcaggtcatcgtgttttccaacaccaagatcggcacc
gcgaggctggcgcgccagctcgagcgtgacggcgtgaaggccgagtcgatccacggcgac
aagacccagggcgaccgcatgaaggcgctcgaggcgttcaaggccggcgatctggaagtg
ctggtggctaccgacgtcgcggcgcgcggcctggacgtggccggcgtgccctgcgtcatc
aactacgacctgccgtacaacgccgaagactatgtccaccggatcggccgcaccggccgc
gccggcgcgtcgggcgaggcgatcgccctgttcaccgccgacgaagagcgctatctgctc
gacatcgagaagctgatcaagcgccaggtgccgcgcggcaagctggaactgccggccgac
ctggttgcgcgcagccatggccgcgaccgcgacgccccgcgcgagcgtggcgccgaccgc
caccgcggcgaacgccgcacgtcgggcgcggccgcgccgcgccagccggtcgacgaactc
ttctacaagccttacgagcctgccgacggccagccggcgtcgcccgaggcgcccaagccg
gaagggcgcagcaacgcgcccaagcgccaactggcagtgctgctgggcggcagccgcaag
ggctga

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