Borreliella burgdorferi N40: BbuN40_0232
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Entry
BbuN40_0232 CDS
T02075
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K05788
integration host factor subunit beta
Organism
bbn
Borreliella burgdorferi N40
Brite
KEGG Orthology (KO) [BR:
bbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbn03032
]
BbuN40_0232 (hup)
03036 Chromosome and associated proteins [BR:
bbn03036
]
BbuN40_0232 (hup)
03400 DNA repair and recombination proteins [BR:
bbn03400
]
BbuN40_0232 (hup)
DNA replication proteins [BR:
bbn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BbuN40_0232 (hup)
Chromosome and associated proteins [BR:
bbn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BbuN40_0232 (hup)
DNA repair and recombination proteins [BR:
bbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BbuN40_0232 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
DEK_C
Motif
Other DBs
NCBI-ProteinID:
ADQ29734
LinkDB
All DBs
Position
complement(236464..236790)
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AA seq
108 aa
AA seq
DB search
MSFSRRPKVTKSDIVDQISLNIKNNNLKLEKKYIRLVIDAFFEELKSNLCSNNVIEFRSF
GTFEVRKRKGRLNARNPQTGEYVKVLDHHVAYFRPGKDLKERVWGIKG
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttcaagaagaccaaaggttactaagtcagacattgttgatcaaatatctttg
aatattaaaaataataatctgaaattagaaaaaaaatacataagacttgtaatagatgct
ttttttgaagagcttaaaagtaatctttgttcgaataatgttattgagtttagatctttt
ggtacatttgaagttagaaaaagaaagggacgcttaaatgctcgcaatcctcaaacaggg
gagtatgttaaggtcctagatcatcacgttgcgtattttcgtccaggcaaagatttgaaa
gagagagtgtggggtatcaaaggttaa
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