Borreliella burgdorferi N40: BbuN40_0502
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Entry
BbuN40_0502 CDS
T02075
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bbn
Borreliella burgdorferi N40
Pathway
bbn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BbuN40_0502 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbn03021
]
BbuN40_0502 (rpoA)
03400 DNA repair and recombination proteins [BR:
bbn03400
]
BbuN40_0502 (rpoA)
Enzymes [BR:
bbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BbuN40_0502 (rpoA)
Transcription machinery [BR:
bbn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BbuN40_0502 (rpoA)
DNA repair and recombination proteins [BR:
bbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BbuN40_0502 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RAD51D_N
Ribosomal_S6
ApoB100_C
Motif
Other DBs
NCBI-ProteinID:
ADQ29071
LinkDB
All DBs
Position
506646..507680
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AA seq
344 aa
AA seq
DB search
MLVEKFLKDFTIPEKIEFLKSQGDGSYGKFTIYPFERGFGITIGNTLRRVLLSSIEGYAI
TAMRVQSNNKDSSSKVVSSEFDLIPGVSEDTLEIIANIKNIHLKLGEGEQKKTISFSVSG
KDTNVLKASHFERDGVEVFNKDLVIATLSRDVNLDLEFQINYGRGYVSSEQNSKYLEEVN
VIALDSIFSPIEKVSYSVEDTRVGQRSDYDKLVMEIWTTGVISAKDAIKKAASIVREFLF
PLVDFEDNVNTSFEKSKSESSNLLDMSIEKLNLSVRSLNCLAKENVRTLGELISKNAEEL
SKARNFGKKSLEEIIEKLGSYRLYLGMSKEDALSVLSKNVKISE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtggaaaaatttttgaaagatttcactatacctgaaaaaattgaatttttgaaa
agccaaggtgatgggtcttatggtaaatttacgatatatccttttgaaagaggctttgga
attactataggtaatactttaagacgtgtgttactttcttctattgaagggtatgcgatt
actgctatgagagttcagtctaacaataaagactcttcgtcaaaggttgtttcaagtgaa
tttgatttgattcctggagtttctgaagatactcttgagattattgctaatattaaaaat
attcatttgaaacttggagaaggagagcaaaaaaagacaataagctttagtgttagcggt
aaagacaccaatgttttaaaagcttctcattttgaaagagatggagttgaggtttttaat
aaagatttagttatagccactttatcacgcgatgttaatttggatcttgaatttcaaatt
aattatggtaggggttatgtgtcttctgagcaaaattctaagtatttagaagaagttaat
gttattgctttagattctatattttctcctatagagaaagtttcgtattctgtagaagat
actagggttggtcaaaggtcagattatgacaagcttgtaatggaaatttggactacaggt
gtgatttctgccaaagatgcaataaaaaaggctgcatcaatagtaagagagtttttgttt
cctcttgttgattttgaagacaatgttaatacatcttttgagaaatcaaaatcagaaagt
tctaacttacttgatatgagtattgagaaattgaatttgtcagtcagatctttaaattgt
ttggccaaagaaaatgttaggactttaggagaacttattagtaaaaacgcagaagagctt
tctaaagctagaaattttgggaaaaaaagtttggaagagataatcgaaaaacttggttct
tatcgattatatttaggaatgtctaaagaagatgctctatctgtattgagtaagaatgtt
aaaatatctgaataa
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