Babesia bovis: BBOV_I002600
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Entry
BBOV_I002600 CDS
T01085
Name
(RefSeq) RNA polymerase Rpb3/RpoA insert domain family protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
bbo
Babesia bovis
Pathway
bbo03020
RNA polymerase
bbo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBOV_I002600
09124 Replication and repair
03420 Nucleotide excision repair
BBOV_I002600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbo03021
]
BBOV_I002600
03400 DNA repair and recombination proteins [BR:
bbo03400
]
BBOV_I002600
Transcription machinery [BR:
bbo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
BBOV_I002600
DNA repair and recombination proteins [BR:
bbo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
BBOV_I002600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
5477126
NCBI-ProteinID:
XP_001608910
UniProt:
A7AWB4
LinkDB
All DBs
Position
1:complement(247235..248755)
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AA seq
382 aa
AA seq
DB search
MEWSSRQLRPSIDIVSLTSTKMIFILLNADVATANSLRRIMLSEIPSLAIEVVTVLENTS
VLHDEYIAHRLGLLPIESSSARNFEYRDKCTCSDKCSRCTVEYSLDVKCMDDTRVVTHYD
INLDSWENSRGNVNAPMPVPRPSADALGNAPGDQGSDPQRVNSSGNATARNVQNPDGPHT
GAVDRKSGSVPTGGIPIVKLKRGQCLSLKMTATKGLGKFHAKWMVANVAYKMEPVITINR
QVAEKMNLNEKTQIVQSCPRKVFKLSNPHGAYSTATKAEIVIDNNLNCIYCDECLNQARE
MGYRDLIRVQPDETKFHFTIESNGAISPEKILEICLDTLEEKLGSLHQHFLEAQARSIGA
KVHTTSKSGVTTMGGSSGIDLD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggagtggagcagtcgtcagttgcggccgtcgattgacatcgtgagcctgaccagcact
aaaatgatatttatccttctgaatgctgatgtggctactgctaattctttacgtcgtatt
atgttaagtgagattccttcgcttgctattgaggtggtgactgtactggagaacacatcc
gttctccatgatgaatacattgctcaccggttgggtttgttacccattgagtcgagtagc
gctcgtaacttcgagtaccgtgacaagtgcacttgcagtgacaagtgttctcgctgtact
gttgagtactccctggacgtcaagtgtatggatgacactcgggtagttactcactacgac
ataaatctggacagctgggagaattctcgtggtaatgtgaatgcgcctatgcctgtacca
cgtccttcagctgatgctctgggtaatgctcctggcgatcagggcagcgaccctcagcgg
gtgaacagttcaggcaatgccactgcaaggaacgtgcaaaatcccgatggtcctcacacg
ggtgctgttgaccgtaaatccggcagtgtacctactggtggtatccctatagtcaagtta
aagcgtggccagtgcctcagcttgaagatgactgctactaagggtttgggtaaattccat
gccaagtggatggttgccaatgtggcgtacaagatggagcctgtgattaccattaaccgc
caggtggctgagaagatgaatttgaatgagaagacgcagatagtgcaaagctgccctcgt
aaggtattcaagctatcaaatcctcacggcgcgtactccactgctaccaaggctgaaata
gttatcgacaacaatttgaactgtatctattgcgacgagtgtttgaaccaagcccgtgag
atgggttatcgtgatttaattcgtgttcaacctgacgagaccaagttccactttaccatt
gagtcgaatggtgccatatcacctgaaaagatacttgagatttgccttgacactttggag
gaaaagctaggatcgttgcatcagcactttttggaggctcaggctaggagcatcggtgct
aaggtccatacaacttctaaatctggtgtaactactatgggtggcagctcaggaatcgat
cttgattag
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