Babesia bovis: BBOV_I002940
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Entry
BBOV_I002940 CDS
T01085
Name
(RefSeq) RNA Helicase associated domain (HA2) family protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bbo
Babesia bovis
Pathway
bbo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BBOV_I002940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbo03041
]
BBOV_I002940
Enzymes [BR:
bbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BBOV_I002940
Spliceosome [BR:
bbo03041
]
Complex C
Other components
Step II factors
BBOV_I002940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
S1
DEAD
AAA_22
AAA_19
T2SSE
nSTAND3
AAA_29
Cas3-like_C_2
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
5477160
NCBI-ProteinID:
XP_001608944
UniProt:
A7AWE8
LinkDB
All DBs
Position
1:316586..320448
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AA seq
1156 aa
AA seq
DB search
MSLEGLLELQSLSVNAKVAQILKNHLDTDHPDLVDFIIHLAKRARNATEFNKLLDENDAE
MPLALGEQLFNTVMALSTNQPRGGTWDDIISSENDDRLNFPALCMKNIATQTQDIYKLEP
KKDGELSEAAKKLLEQETVASYQRDRGDDVRSRSDRYARDYHDRDRYSDRHHSRGDEYRH
RDRTERVYRNREDRSRRSASSSPESLPYLDDKGAIFKGRVTKVVEFGGFVRFKSKNGIHS
GLVHVSEILPGNRRLSEASEALKEDMVVYVKKIGMKNDKISLSMKSVDQKTGRDLCSGHQ
DSMQSYYTMGAPMLQNTASSSDAILDYSNGMDGRKRRMMTDLERWEHQQLVNSGVLPKSE
RVAMDLAAQHEPELDEEIDIEINDACPTFLKGQTRRSGIELSPIKIVSNPEGSLARTIAT
SSTIAKERRETERMQEDTIQRSAGAGSMTNNSTSQFMEELRRMNMKQRREGALHDKRDPG
TRKDGHNAIKTIQEQRESLPIFALRDELLQAVQENDILIVVGETGSGKSTQIPQYLAESG
YTSGSDGESMVIGCTQPRRVAAMSVAKRVSEEVGCRLGQEVGYCIRFEDCTTKDTVIKFM
TDGMLLREVLQDPLLEQYACIMLDEAHERTIATDVLFALLKNCCSKRENFKLIVTSATLE
AEKFSTYFNDASIFSIPGRMFPVEILHTTDQESDYMEASLITVLNIHLNEPAGDILLFLT
GQEEIDVACRTLHERMKRLESMSPPPLIILPVYAALPGEMQGAIFEPTPPGCRKCVIATN
IAEASLTIDGIFYVIDPGFAKVKRYNPRTGMESLVVVPISQASAKQRAGRAGRTGPGKCY
RLYTEDAYRSEMLPTAVPEIQRTNLANVVILLKAMGINDFLNFDFMDKPPVETLIDALDN
LYHLGALDDEGLLTRLGRKMAEFPMDPNLAKMLLTSVDLECSDEVITIVSMLSIQNIFYR
PQDKQAEADRAKSRFTQAEGDHLTLLYVYNQWRKNKFSSVWCHENFLQSRALLRAQDVRK
QLISIMDRYRFKVVSCGNNAEVISKSVCAGYFHHSARRDPQEGYRTIVDQQNVFIHPSSA
LYNRSPEYVVYHELVMTTKEYMRDLTIVKAQWLLELAPSMFKRSEGVSKSKMGQKIEPLH
NKFEEKDGWRLSKRRG
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtcactagagggtttgctcgagctgcaaagcctcagtgtcaacgccaaggttgcacag
atactcaagaatcatctagacactgaccatccagacttggttgacttcatcatacactta
gcgaaacgcgcgcggaatgcaactgagtttaacaaacttctagatgaaaatgatgctgag
atgcccttggcacttggtgaacagctattcaataccgtgatggcactgagcacaaaccaa
ccacgtggtggcacatgggatgatatcatatcatctgaaaatgatgatcgtctcaacttt
cccgcactatgtatgaaaaacatcgcaacgcaaacacaggatatatataagttagaacct
aaaaaggatggcgaattgtctgaggctgctaagaagttgcttgaacaggagactgttgcc
agctaccagagagaccggggggatgatgtaagatcaaggagcgaccgatatgcacgagat
tatcatgatagggatagatatagtgacagacaccattctcgtggtgatgaatataggcat
agagatcgtactgaacgagtatatcgcaacagggaggacagaagtagaagaagtgccagc
agcagtcccgagtcattaccctacctagatgataaaggtgcaatatttaaggggcgagta
acaaaagtggtagagtttgggggttttgtaaggttcaaaagtaaaaatggcattcactcc
ggtttggtccacgtgtctgagatactaccgggaaatcgcagactttctgaagcaagtgaa
gccttgaaagaagatatggtagtatatgtaaagaagattggtatgaaaaacgataaaata
agcttatcaatgaaatcagttgaccagaaaacaggaagagacctatgtagtggacaccag
gattccatgcagtcttattacaccatgggagcccctatgttgcagaatactgcatcaagt
tctgacgctatcttagattactccaatggcatggacggcaggaagcgccgtatgatgact
gaccttgagcgctgggagcaccagcaacttgtaaacagtggcgttctccccaagagcgaa
cgtgttgcaatggacctggctgctcagcatgaacctgagttagatgaagaaatagatatc
gagatcaatgacgcgtgtcccacgtttctgaaaggacagaccagaagatcaggcatcgaa
ctgtcacccataaagattgtatcgaatcctgaaggatcactagcaaggactatcgcaaca
agttccactattgccaaagagcgtagggagactgaacgtatgcaagaggacactatacag
cgttctgccggtgctggcagcatgaccaacaacagcacgtcgcaatttatggaagagctg
cgtcgcatgaatatgaaacaacgcagagaaggtgcattacatgataagcgagatcctggc
actcggaaggatggccacaatgccatcaagactatccaagaacaacgggagtctctgcca
atctttgcattgcgcgacgagcttttgcaggcagtgcaagaaaacgatattttaattgta
gttggagagacaggtagcggtaagagcacacagatacctcagtaccttgctgaaagcggt
tatacatctgggagtgatggagagtccatggttattggttgcacccaaccaagaagggtg
gctgcaatgtctgttgccaaacgtgtgtcggaagaagttggctgcagattagggcaggaa
gtaggttattgcatcaggttcgaggattgtaccacgaaagatacggtgataaagtttatg
accgacggtatgctgcttcgcgaggttttacaagatcccttgctggaacaatacgcttgc
atcatgctagacgaggcacacgaacgtaccattgcaaccgatgttctattcgcactctta
aagaactgctgcagcaagcgtgaaaatttcaagttaatagtgacttccgccaccctggaa
gctgagaagttttcgacgtacttcaacgatgccagcatcttctctataccggggcgcatg
ttccccgtggagatacttcacaccactgaccaagaaagcgactacatggaggcatcgctg
attaccgtgctcaatatccatctcaacgagccggcaggtgatatcctactgttcctgacc
ggacaagaagagattgacgtggcctgcaggacactgcatgagcgtatgaaacgtctggaa
tcaatgtcacctccgccgttgataattctgccggtatatgcagcattacccggggagatg
caaggggcaattttcgagcccaccccgccaggatgcagaaagtgcgttatcgctactaac
atcgcggaagcgtcacttacaatagatggtattttctatgtcattgaccctggttttgcc
aaggttaagcgttacaatccgcgtaccgggatggagtctcttgtggtagtacctatatcg
caagccagtgctaagcagcgtgctggtagggctggaagaacgggccctggaaaatgctac
cgactatacaccgaggatgcctacagatctgaaatgctgcctacagcagtaccggaaatc
cagcggaccaatttggccaatgtggtcatcctattaaaagcaatgggcatcaacgatttc
ctcaactttgattttatggacaagccgcctgtggagactctgatcgatgctttggacaat
ttgtaccatctaggcgccttggatgatgagggccttttgacccgtttgggtcgcaagatg
gctgaatttccaatggaccccaacctagccaagatgctgctgacgtctgtagacctcgag
tgctccgatgaggttatcaccattgtctccatgctctcgatacagaatatattctacaga
ccacaggacaaacaggcggaggctgacagagcgaaatctagatttacacaagctgaaggt
gaccatttgacgttgctctatgtatataatcagtggcgcaagaacaagttttcctctgta
tggtgtcatgaaaactttctccagtcacgagcactcttaagggctcaggatgtgaggaag
cagttaatatctattatggacaggtatcgcttcaaagtggtgtcttgtggcaacaatgct
gaggtgatttctaaatcagtctgtgccggatacttccatcattcagctaggagggaccct
caagaaggctatcgcacaattgtagatcagcaaaatgtatttatacacccgtcttccgcg
ctgtataacagatcgccagagtatgtcgtctaccacgaattggtgatgaccaccaaggaa
tacatgcgcgacctcactatagtaaaggcacagtggctcttggagttagcgccttcaatg
ttcaagcgctccgaaggagtgagtaagtcaaagatgggtcagaagattgagccgctccat
aacaagttcgaggagaaggatggctggaggttgtcaaagcgccgtggctag
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