KEGG   Babesia bovis: BBOV_I003540
Entry
BBOV_I003540      CDS       T01085                                 
Name
(RefSeq) RNB domain family protein
  KO
K12585  exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
bbo  Babesia bovis
Pathway
bbo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BBOV_I003540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbo03019]
    BBOV_I003540
Messenger RNA biogenesis [BR:bbo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     BBOV_I003540
SSDB
Motif
Pfam: RNB OB_Dis3 CSD2 OB_HELZ2 Rrp44_CSD1
Other DBs
NCBI-GeneID: 5477220
NCBI-ProteinID: XP_001609004
UniProt: A7AWK8
LinkDB
Position
1:complement(448250..451314)
AA seq 951 aa
MIDADDVLTEQLPLKRSVRTFWRASGHSNVKRFTREVYYRTDLGCGLDSCTECPRSSTQG
TLDGSKPILILTVDVLLNQMTFCERCLDNCVIPATVANEVRRRSLTLYARMKRLILSGTG
NDVVMNDVDHVPKSFYLFSNENFEPTHVEERGNITTAQRDELLIERCAEWYRSHVPSSNR
VIILRNNNSQDPLVNEDALSVDSDPSASGSSALERLTVEDWATELKPIVTDVFEYVAARR
TDQRHHSDNASDDGSIYPAHLSEMEMQDGIDSGRYHRGVLHMYPGSFQNGYVSCGEDEYK
VCGTYNLNRAIHGDAVCIEIVTDGMDVVVPDSGDDAAVPEDIVAEDSEDIKLLDVDKTDK
PLECLKKECRVVGILKRNWREYCGTLMAVDEAIDMVGHSHMVQRIFVPVDARIPYICIDT
RKSSELENKRIVVVIDSWDRFSRKPSGHWVEIIGDVEDLETESAVILREHEVITREFPPK
AYMELPPADWKPGAEDIKLRKDFRKNLVFSVDPPGCKDIDDALGFSVLDNGNIEVSVHIA
DVTHFVKAGSFIDKEASKRCTTVYLVDRRTDMLPSLLTTNLCSLVPNEDRLCFSVVWQFD
RNNEIVDTQFYKGIIRSSRAFTYKDAQDLIDAGGSDNITEALKGLDNIAKILRAKRFESG
AVELESPEVKFEYELTDVRKMQKYVLYDTNRMVEEFMLLANVSVATKIFERFPTSALLRR
HPPPVDERLKVLQRSLSQHGIEFEFGNSRDLNLSLKRLVQSGDPRLGSALRIMTTRCMSQ
AVYCHSGEAGVTSFKHYGLSSELYTHFTSPIRRYADVIVHRMLAAALDIEAMDTSFYQEL
SSQCEVLNKRHRNATWCGRESSRLFAYLFLKQKGEVTATATVIGTSEKRICVIAHELGIE
ATARVDISEFDAQTQRATLACGKHVNLFDHVTVKLSAENKHYRYNIKAELI
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgattgatgcagatgatgtattaacggagcagcttccgttgaagcggtccgtcaggacc
ttctggcgtgcgtcagggcacagcaacgtcaagcgctttacgcgtgaagtttactatcgc
accgatttgggttgtggtttagatagctgcacagaatgtccacgatcttctactcaaggc
actctagatgggagcaagccgatattgatcttgacggtggatgtcttgttaaaccagatg
acattttgcgagcgatgtttggataattgtgtgattccagcaaccgtggctaacgaagtt
cgtcgtagaagccttactctttacgctcgcatgaaaaggcttatcctatctggtactggt
aatgatgtcgtcatgaacgatgttgaccacgtgccaaaaagcttctatctattttctaac
gagaactttgaacctacacacgtagaggagcgtggtaatatcacaacagcccagcgtgat
gagcttttaattgaaaggtgtgctgaatggtaccggagccatgtgccgtcgtctaatagg
gtgattattctgcgtaacaacaattcgcaggatcctttagtaaatgaagatgcattatct
gtggactcagatcctagtgcatcgggatcttctgctttggagcgtttgacagttgaagac
tgggccactgaactgaagcctattgttactgatgtatttgaatatgtagccgcaaggcga
acggatcaacgacatcactctgacaacgcctctgatgacggtagcatataccctgcgcat
ctctcagaaatggagatgcaggatggtattgacagtggaaggtaccatcgtggtgtgctc
catatgtatcccggttccttccaaaacggctatgtatcctgcggtgaagatgaatacaag
gtttgtggtacatacaacttaaaccgtgcaattcacggtgacgctgtgtgtattgaaatc
gttaccgatggtatggatgtcgtcgtcccggatagtggtgatgacgcggcagtgccagag
gatatagttgctgaagactcagaggacattaaactcttggatgtagataaaactgacaaa
ccactagaatgcctgaaaaaggaatgccgggtcgtcggtatattgaagcgcaattggcgt
gaatactgtggtaccttaatggcagttgacgaggctattgatatggtcggtcatagtcat
atggtacaacgcatatttgtccccgtggatgcacgtattccgtacatatgcatagatacg
cggaagtccagtgaactcgaaaacaaaaggatagttgtggttatcgacagttgggatcgt
ttttctaggaagccaagtggccactgggtggaaataataggtgatgtagaggacttggaa
actgaaagtgcagttatattgcgtgaacatgaagtaattacccgtgaattcccaccgaag
gcctatatggagctaccaccagcagattggaagcctggagctgaggacatcaagctccgg
aaggacttccgcaagaatctagtgttttccgtggatccaccaggttgtaaagatattgac
gatgcgcttggtttttctgtgttggataacggtaacatcgaggtttctgtacatatagct
gatgtaacccattttgtcaaagctggcagtttcatcgataaggaggcttcaaagcgatgc
acaacagtatacctggtagatagacgtacggacatgcttccgtcgctcttaactactaat
ttatgttcgctggtgcctaatgaagaccgtttgtgtttttctgtggtttggcaatttgat
agaaacaacgaaatcgtggatacacaattctacaagggtatcatacgcagctctcgtgcc
ttcacttacaaggatgctcaggaccttatagacgctggagggagtgacaacattactgag
gcactaaagggtttagataacatcgcaaagatattgcgtgccaaaaggttcgaaagcgga
gctgtcgaactggagtcgccagaggttaagttcgagtacgagttaaccgacgtccggaag
atgcagaagtatgtattgtacgacacaaatcgtatggttgaagagttcatgcttctggcc
aacgtgagtgtggcaacaaagattttcgaacgctttcctacctcagcactgctgaggagg
catcctcctccggtggatgagcgtctcaaggtgctacagaggtcgctatcgcaacatgga
attgaattcgaattcggcaattcgcgcgacctcaatctatcgctaaagcgcctagtacaa
agcggtgatccacggctgggtagcgcattgcggataatgaccacgcgatgcatgagtcaa
gctgtttactgtcattccggagaagcaggtgttaccagcttcaaacattacggactcagt
agcgagctctatacccattttacatcgcccattcgtcgttacgctgacgttattgtgcat
cgcatgcttgccgccgcgcttgatatcgaggccatggacaccagcttctaccaagagctg
tcctcgcagtgtgaggtgctcaacaagcgccacaggaacgccacatggtgtggtcgcgag
tccagccgtttgttcgcatatctctttctcaagcagaagggtgaagtgacagccactgct
acagtcattggcaccagtgaaaagcgaatatgcgtcattgcccacgagcttggcatcgaa
gctactgcgagagtggacatctcggagtttgatgcgcaaacccagcgtgcgacgctagcc
tgcggcaagcacgttaaccttttcgatcacgttaccgtcaagctcagtgctgaaaacaag
cattacagatacaacataaaagcagaattgatataa

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