KEGG   Babesia bovis: BBOV_II003890
Entry
BBOV_II003890     CDS       T01085                                 
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
bbo  Babesia bovis
Pathway
bbo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BBOV_II003890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bbo03041]
    BBOV_II003890
Spliceosome [BR:bbo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    BBOV_II003890
 Complex C
   U5 SnRNP specific factors
    BBOV_II003890
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_RIG_2nd WD40_like Beta-prop_HPS5 Beta-prop_EIPR1 WDR90_beta-prop_4th PQQ WD40_RFWD3 CILP_C RMC1_N Beta-prop_IP5PC_F PQQ_2
Other DBs
NCBI-GeneID: 5478141
NCBI-ProteinID: XP_001609912
UniProt: A7ATT3
LinkDB
Position
2:complement(897805..899031)
AA seq 315 aa
MGDVVEKRTSSLKSPVLLLTGHEGEVYCIEFSADGQLLASGSKDKNILLFEVYGDCRNIG
VLSGHKNAILELHWNANGDLLYCCSADQTASLWDVEYQKRSHKYVGHTGIVNSCYPGRGV
VGGLLVTGADDGTVKLWDHRSKRPIKSIENDFQILSVCCEKSGERIFYGSLDNTIRAYDV
RNDKEVFKLEGCTDSVTSVDLNHDGTLLLSNSMDSRLVVWDVQPYCTESSRVKTALFGPT
HSVEKNLIRARWGKDSIIASGSADNMVYILDTNDNKVLYQLPGHLGSVNEVVLHPNEPIV
ASASSDKCIYMGELL
NT seq 948 nt   +upstreamnt  +downstreamnt
atgggcgacgtcgtagaaaaacgaacatctagcttgaaaagcccggtattattacttaca
gggcatgaaggcgaggtgtattgtatagagttttctgctgatggtcagctcttggcctct
ggcagtaaggataagaacatcctcctatttgaggtctacggcgattgtcgcaatataggc
gttctaagtggccacaagaatgcaattcttgaattacactggaatgccaatggtgacctt
ttatattgttgctccgctgaccaaactgcatcgctatgggatgttgaatatcagaagcgc
tcacataaatatgtgggtcatactgggatcgttaacagctgttaccccggtagaggcgtt
gtcggaggtctgctggtaacaggagcagacgacggcaccgtgaagctttgggaccaccgt
agcaaacgtcctataaaatctattgaaaatgatttccaaatactgtccgtttgctgtgaa
aagtctggtgaacgtattttctacggtagcctggacaacacaataagggcctacgacgta
cggaatgataaggaagttttcaagttggagggatgcacggattccgttactagtgtcgat
ttgaatcacgatggaaccttacttttgtcaaactctatggactcgcgtttagtggtttgg
gacgttcagccatattgcactgaaagcagtcgtgttaagacagctttgtttgggccaacc
cactcggttgaaaaaaaccttattcgtgcccgttggggtaaggattccattattgccagt
ggctctgctgacaatatggtatacatattggacaccaatgacaacaaggttctgtaccag
ttacccggacacctgggctccgttaacgaggtcgtacttcatccaaatgagcctatagtg
gcctctgcatcatcggacaagtgcatttatatgggcgagctactttaa

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