Babesia bovis: BBOV_II004270
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Entry
BBOV_II004270 CDS
T01085
Name
(RefSeq) putative splicing factor 3b subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
bbo
Babesia bovis
Pathway
bbo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
BBOV_II004270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbo03021
]
BBOV_II004270
03041 Spliceosome [BR:
bbo03041
]
BBOV_II004270
03036 Chromosome and associated proteins [BR:
bbo03036
]
BBOV_II004270
Transcription machinery [BR:
bbo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
BBOV_II004270
Spliceosome [BR:
bbo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
BBOV_II004270
Complex B
BBOV_II004270
Complex C
U2 SnRNP specific factors
BBOV_II004270
Chromosome and associated proteins [BR:
bbo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
BBOV_II004270
TFTC complex
BBOV_II004270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
5478179
NCBI-ProteinID:
XP_001609950
UniProt:
A7ATX1
LinkDB
All DBs
Position
2:complement(994815..998535)
Genome browser
AA seq
1169 aa
AA seq
DB search
MPVFFHLTLQRPTGITQAVQGNFSAPKAQEIVVVRSHTIELLSPDDSGKLRSLCVSEVFG
IVRVVSTFRLTGTQRDYLVVCSDSGRLVILEYCNVSATFKRVHCETYGKTGIRRIVPGQY
LAVDPKGRALIVGAVEKEKFVYILNRDSKANLTISSPLEAHKSRSICHALVGLDVGFENP
IFVSIEESYEAVDAAQVDEDEEVTDDIIKKGLSFWEMDLGLNHVVRKMTLPVDISAHHLI
PIPGGDGPGGVIVCCENFLLYRKIDHPEVLCAYPRRLEMAQDKPLMMVSSALHKMRDFFF
VLVQSEYGDIYKIELFHEEGKVNEIVCRYFDTVPLGNSICILRAGYLFVAAEFGDHQLYQ
FTGIGTNENDPLCSSIHPQGKDAIVAFKPRVNQNLQLVDELSSLSAITDLKVIDVQGLGQ
QQIFLGCGKGERSTLRVLRHGLSVEELADNELPGRPKQVWTVPTGVDSIYDGFILVGFEG
NTLVLSVGEAVEEVTDSCFLTSITTLHVSMMGDGSYIQVHDGGVRHVYDMKVREWKTPTA
KRVKVAASNQHQLVLALSGGELVYFELDESHTLVEVAKRSLNVEITCLSLQPTAKGRLMA
NFMSVGALDNLVRVLSLDRQLKQYSTQLLPNNSTPESVCIAEFQIGTHPVLMLVVGLNTG
VMIRATIDAVSGALSDQYTRFLGSRAVKFKYIKNQVIGTSDRPWLLYEYQGVVQCLPLSY
DTLESVASFSSPLCNDGYVAISGSNLRIFRCCRLGETFSEHRLPLDYTPRKLVMMPNEAP
NVGGLNYMVAVVESDHNAYGPENVAEISKALGDIKLDNEVGDLLPLANYKAGTGRWASCV
RIVNPLNLTTAAKLLFETNEAATAAAVVVLDGMQCLCIGTTVGYDLKNTDDVESYIRVYC
YGANFEIRLLHVTRVGGVVRAFTGYEGRLLASVGKRIRLYALGKKQLLLKAEHRTCSDHG
FIWLNAVGSRIFAGDIREGIQILRIKFYSEEAAEFEWVGGATGPRWLTSCAQLDYSTVIA
GDKFDSIFVTRVPQEESTRHIQLENVCQFHLGDLPTAMDKAALSQSTHVVLYGTVMGSIG
ALVPFQSKDELDFLQHLEMLMATEAPPLCGREHSFYRSYYVPVQQVVDGDLCEQFRHLTE
AQQRKVAQQLDTTVNNVLRKLDDIKNRIM
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgccggttttcttccacctcacgcttcaaaggcctacgggcatcacgcaagccgtacag
ggcaacttctcagccccaaaagctcaggaaattgtagtagtaaggtcacataccatagaa
ttgctgtcaccggatgatagcggtaagctaagaagcctttgtgtctccgaggtctttgga
atagttagggtggtctctacgttcaggttaacaggaacacaacgtgattatttagttgta
tgctcggatagcggacggttggttatacttgaatattgcaatgtgagtgctacattcaaa
agggtgcattgcgaaacatatggaaagactggtatcagacgtatagttccaggtcaatac
ctcgcagtagatccgaaaggaagagcactgatagtgggtgctgtagagaaggagaagttt
gtttacatcttaaatagagatagcaaggcgaacctaacaatatcatcacccttggaagcc
cataagagccgatctatttgccatgccctagtcggactagatgtgggttttgaaaaccct
atttttgtctccattgaagaaagttatgaagcagtagatgcggctcaagtggatgaagat
gaggaggttaccgatgatattattaaaaagggtctcagtttctgggagatggaccttggt
ctcaatcacgtagttcgaaaaatgacattaccagtggatataagtgcccaccatctgata
cctatacctggaggagatgggcctggaggtgttattgtatgctgtgaaaacttcttgctg
tacagaaagatagatcacccagaagttctatgcgcctatcctcgcaggttggaaatggca
caggacaaaccgctcatgatggtgtcaagcgctttacataaaatgcgtgatttcttcttt
gttctggtgcaatcggaatatggagatatatacaaaatagagctattccacgaagaagga
aaggtgaacgaaattgtctgtcgatactttgataccgtacctcttgggaactccatttgt
attttaagggcagggtatctgttcgtagccgctgaattcggtgatcatcaactgtatcaa
tttaccggaataggtaccaatgaaaacgaccctctgtgcagctccatacatccccagggt
aaagatgccatcgtagctttcaaaccaagggtcaaccaaaacctgcaattggttgatgaa
ctcagctctttaagtgcaatcaccgatcttaaggtgatagatgtccaaggtctaggtcaa
cagcagatatttttaggttgtggtaaaggtgaacgtagcaccctcagagtattgaggcac
ggactcagcgtagaggagttagccgacaacgaactgccgggaagacccaaacaagtctgg
acagtgccaactggtgtagacagtatatatgatggatttatacttgtgggttttgaagga
aacacactagtgctctccgtaggtgaagctgttgaagaagttactgattcgtgctttttg
acttctatcacaactctccatgtaagcatgatgggagatggatcgtatatacaagtacac
gatggaggtgtgaggcatgtctatgatatgaaggtacgtgagtggaaaacacccactgcc
aaacgtgtcaaagttgcagcatcaaaccaacaccaattagtgttggcactatcgggaggg
gaactagtatattttgagttagatgaatcgcatacattagtggaagtggctaaacgtagt
ttgaatgtagaaatcacatgtttaagtctccaacctactgctaagggaagactcatggca
aactttatgtcggttggtgcgctcgataatttggttagggtactatcattggacagacag
ttgaagcaatatagtacgcaactgcttcctaataacagcacgccagaatctgtatgtata
gccgaattccaaattggaacgcatcccgttctgatgttggtagttggacttaacacgggt
gtaatgatacgcgccaccatcgatgcagtttccggggctttgagtgaccaatatacacgt
ttcttagggtcacgagctgttaagtttaagtatatcaaaaatcaggtcataggaacatcg
gaccgaccctggctgctttatgaataccaaggtgtggtacaatgcttgccgttaagctac
gatactcttgagagtgtcgcttctttctctagtccgttgtgtaacgacggatatgtcgca
atatcggggtctaatctgcggatattcagatgctgcagattaggcgaaacctttagtgaa
cataggttaccacttgattatacgccaaggaaactggtaatgatgcccaatgaggcccca
aatgtaggaggtctcaactatatggtggcggtggtcgaatctgaccataacgcatatggt
ccagaaaatgttgctgaaatttcaaaagcattaggtgacatcaaattagataatgaagtt
ggtgatctgcttcccttggccaactacaaagcaggaactggaagatgggcctcatgtgtg
agaatcgttaacccgctgaatctcacaaccgcggctaagctgctttttgaaactaatgaa
gctgccacagcagctgcagtggttgtactagatggaatgcaatgcctctgcataggaact
actgtaggatatgaccttaaaaacactgatgatgtagaatcatacatcagggtctattgc
tacggcgccaactttgagattcgtctgcttcatgtcacacgcgttggtggagttgtccgc
gcatttacaggttatgaaggtagactgctcgcttcagttggaaaacgcatcagattgtac
gcattgggaaagaaacaattgctactaaaagctgaacatcgcacatgcagcgatcatgga
tttatatggttaaatgcagtaggatccaggatttttgctggtgacattcgcgagggtata
caaatcttgcgaattaaattttacagtgaagaagctgctgaatttgaatgggtcggtggt
gcgaccgggcccagatggctaacttcatgtgctcaattggattactcaaccgtgattgct
ggtgataagttcgactccatctttgtcactagggttcctcaggaagaatctactagacat
atacagttagaaaatgtttgccaattccatctaggtgacctacccactgccatggataaa
gccgctttgtcacaatcgacccatgttgtattgtatggtaccgttatgggatccattggc
gctttggttcccttccagtccaaagatgaactagattttttacaacatctggaaatgctg
atggctactgaagcccctccactgtgcggtcgcgaacatagtttctaccgcagttattat
gtgcccgtgcaacaagtagtggacggtgatttgtgtgaacaatttaggcatctcaccgaa
gcgcaacaaaggaaagttgcacagcagctggatacaacggtgaacaatgtactgcgcaaa
ctggacgatattaaaaaccgcatcatgtag
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