Babesia bovis: BBOV_III007770
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Entry
BBOV_III007770 CDS
T01085
Name
(RefSeq) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bbo
Babesia bovis
Brite
KEGG Orthology (KO) [BR:
bbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbo03016
]
BBOV_III007770
Enzymes [BR:
bbo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BBOV_III007770
Transfer RNA biogenesis [BR:
bbo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BBOV_III007770
Prokaryotic type
tRNA splicing ligases
BBOV_III007770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
5480157
NCBI-ProteinID:
XP_051623496
LinkDB
All DBs
Position
3:complement(1690658..1692493)
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AA seq
507 aa
AA seq
DB search
MSKRTSYEAECAFIEPYPLAKHMYRVKKGFVPGMNVEGYVFANEKLSKLLFQELEQYTAD
SGTFLPALKQLANVAALPGIVKGSIALPDAHSGYGFSIGNVAAFDMNNPEAVVSPGGVGF
DINCGVRLLRTNLTLNDVTPVKEQLVQSIFDHIPVGVGSQGIIPCTNAALNDILEYGMDW
TVAQGYSWAEDKEHCEEFGRMIQADSTMVSSRAKKRGLPQMGTLGAGNHYAEVQVVEEVY
DKLAAKAMGIHEVNQICVMIHSGSRGLGHQVATDALLHMEASPSASSIKVLDKQLSCAKI
NSPEGINYLKAMAAASNYAWVNRSAITFLMRQAFSKTFGETPDDLDMHLIYDVSHNIAKV
EEHMVDGQCQTLLVHRKGSTRAFGPLHPLVPADYQLIGQPVLVGGTMGTCSYVLTGTELA
MDLTFGSTCHGAGRALSRNKSRCTLDYKDVLNKLYDKGISIRVASPNLISEEAPESYKDV
TDVVQTCHEAGISKKCVKLRPIAVIKG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgcacatcttacgaggcagaatgtgcctttatagaaccatacccattagct
aaacacatgtatcgcgtcaaaaagggcttcgtacccggtatgaacgtagaaggctacgta
tttgccaatgaaaagctatctaagctattgtttcaagaactagaacaatatacagccgat
tcaggtacatttctaccggcattaaagcaacttgccaacgtagcagccttgccaggcata
gtcaagggaagcatagctctgcctgatgcacattcaggttatggattctccataggaaat
gtggcagcgtttgatatgaataacccagaggcggttgtatcaccagggggagtaggattc
gacatcaattgcggagtcagattactacgaactaatctgactttaaatgatgtgacacct
gtgaaggagcagctagtgcagtcaatatttgaccatatacctgtaggagtgggatcacag
ggtatcataccatgtaccaacgcagcccttaacgatatattggaatatggaatggattgg
actgtggctcaaggatactcgtgggcagaagataaagaacattgcgaagagtttggaagg
atgatacaagctgattctactatggtgtcatcaagagctaaaaaaagaggtttaccccaa
atgggtactttaggagcaggcaaccattatgcagaagtacaggtcgtagaagaagtgtac
gataaacttgcagcaaaggccatgggcatacacgaagttaatcaaatatgcgtcatgata
cactctggtagtagaggtttgggacaccaggtagcaacagatgcgttactgcatatggaa
gcatcgcccagtgcatcaagcattaaggtattagacaagcaattgtcatgtgcaaagatc
aactctccggaaggtatcaactatctaaaggcaatggccgcagcctctaactacgcatgg
gtcaatagaagcgctatcacgttcctcatgaggcaagcattctccaaaacgttcggcgaa
actcctgacgatcttgatatgcacctcatttatgacgtatcgcataacatcgcaaaggtt
gaagaacatatggtagatgggcaatgtcagaccctcctggtacatagaaaagggtcaaca
agagccttcgggccgctccacccattagtgccagcggattaccagctaatagggcaaccg
gtgcttgtcggtggcactatgggcacatgctcgtatgtcttaacgggtacagaactggct
atggacctcaccttcggttcaacctgtcatggagcaggacgtgcccttagcagaaacaaa
agcagatgtactctagattacaaagacgtacttaacaagctgtatgacaaggggatatca
attcgagtggcttcaccgaacctcatttcagaagaagcaccggaatcctataaggatgtc
accgatgttgtacaaacgtgtcatgaagctggaatctcaaagaaatgcgttaagctaagg
ccaatagccgtcataaaaggctga
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