Babesia bovis: BBOV_III010480
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Entry
BBOV_III010480 CDS
T01085
Name
(RefSeq) replication factor-a protein 1 (rpa1) family protein
KO
K07466
replication factor A1
Organism
bbo
Babesia bovis
Pathway
bbo03030
DNA replication
bbo03420
Nucleotide excision repair
bbo03430
Mismatch repair
bbo03440
Homologous recombination
bbo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBOV_III010480
03420 Nucleotide excision repair
BBOV_III010480
03430 Mismatch repair
BBOV_III010480
03440 Homologous recombination
BBOV_III010480
03460 Fanconi anemia pathway
BBOV_III010480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbo03000
]
BBOV_III010480
03032 DNA replication proteins [BR:
bbo03032
]
BBOV_III010480
03400 DNA repair and recombination proteins [BR:
bbo03400
]
BBOV_III010480
Transcription factors [BR:
bbo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
BBOV_III010480
DNA replication proteins [BR:
bbo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
BBOV_III010480
DNA repair and recombination proteins [BR:
bbo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
BBOV_III010480
MMR (mismatch excision repair)
BBOV_III010480
DSBR (double strand breaks repair)
HR (homologous recombination)
BBOV_III010480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
CDC24_OB3
DUF223
SHLD2_OB1
Motif
Other DBs
NCBI-GeneID:
5480428
NCBI-ProteinID:
XP_001612170
UniProt:
A7APW8
LinkDB
All DBs
Position
3:2249987..2252459
Genome browser
AA seq
684 aa
AA seq
DB search
MSLPRILTPDFFTQLTDSIQKAGGAVPKEQHESPSSVKVLCIQQSPVGENRHLIEVLDGS
VPVKYKHTCLAIIPTTADGDSQLVGRIISFTKYNVIPTRSRYLILLTNIAILPGDYRHLT
SYLGTNLVYHPSLTVKQQNAEPVSKPVEQAGGFQTSSHVTKQPMAQSGNTTLSSMPSSNT
INTSTSYAQSHHAPTSFSHDSSTNHGPIRNTDDQLMLKKPQSAPYATNTSKPVVKVGDGN
NSGYISIADLTIYTPKWSIRARVLNKTHIKKFNNQWGEGQLFSVDLCDNSGDIRATLFGE
AVTKWYNFIEEGQVYSISGGQLRPANKKFNSLSHACEMSLDENSQILLDRDDQSIPLIRC
NFVPIKQVERLSSGDIIDVIGVVARFNDIKSYQSKSTGTTSDKREILLCDSSGSSVWVTL
WNKKVQQFLTSELETHPIIAMKGVRVNEWQGKKLDTIGTTHITINPAVPEVAKLKNWWAT
EGSQMQFDAGRSSIDNNIEDIISIGALTQAANQAYQFKALGDSGITFTARGMVEVIRENT
FSWPACIECQRKMVNELGQWVCSRCKCTRQPRHTYILSMKISDDTGHLWATASSIVGDEI
MNGIPAAEVLALAGNNDINVDGKNFMNIFEEARLTEYIFKIKVYTETYMDEPRIKYRVTK
AIKLRRCLDTVIKCLIKEIDGMML
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcctcgtatattaactccagatttctttacacagcttactgattcaatacag
aaggctggtggagctgtaccgaaagaacagcatgaatctccttcctctgtaaaggtgctg
tgtatacagcagtctccagtaggagaaaataggcatctaattgaagtgctggatggttct
gtaccggtgaaatacaaacacacatgcctcgcaattattcctacaacggccgacggagat
agccaactggtaggaagaatcattagttttacaaagtacaatgtcatcccaacgaggtct
cgttatcttatcttactcaccaatattgcgatccttcctggagattacaggcatttaaca
tcttatttgggcacaaacctagtataccatcctagtctaacggtaaagcaacagaatgcg
gaaccagtgtctaagccggttgaacaagccggcggttttcagacatcaagtcatgttaca
aagcaacccatggcccaaagtggaaacactacgttaagtagtatgccttcaagtaatacc
attaacacttctacatcgtatgcacagagtcatcacgctccgacttcattttcgcatgat
agcagtacaaatcacggtcctataaggaatacagatgatcaacttatgctaaagaagccg
caaagcgccccttatgctacaaacacctctaaacccgtagtgaaagtgggagacgggaat
aattcaggatatatatcgattgcagacctcactatttacactccaaagtggagtattcgt
gcaagagtgttaaacaaaacacatataaagaagttcaataatcaatggggagaaggacaa
ctgttttctgtggatctatgcgacaatagtggtgatatacgtgcaacgttgtttggcgaa
gctgtcaccaagtggtacaattttatagaagagggacaggtttatagcattagtggtggc
cagctgagaccagcaaataaaaagttcaacagtctcagtcacgcttgtgaaatgtcactc
gatgagaattcacagatattgctggatagagatgatcagtcgataccactgattcgttgc
aatttcgtacccattaagcaagttgaacgcttgtcttcaggtgatataattgacgttatc
ggtgtcgttgcacgattcaatgatataaaatcatatcaaagcaagagtactggtactact
tctgataagagagaaatattgttatgtgacagcagtggatctagcgtatgggttacgctt
tggaataagaaggtccaacaatttcttactagcgaactcgaaactcatcctatcatagca
atgaaaggtgtgagagtcaatgagtggcaaggtaagaagttggacaccataggcacaacc
catattacaattaatcccgctgttccggaagttgcaaaactaaaaaattggtgggcaaca
gaaggatcacaaatgcagtttgatgcgggaagatcatcgattgacaataatattgaagat
attatatccataggcgcacttacacaagctgcaaaccaggcttatcaattcaaagcattg
ggtgatagcggtatcacattcactgcccgtggcatggtggaagttattagggaaaataca
ttttcgtggcctgcttgtattgaatgccaaaggaaaatggtaaacgaattaggtcaatgg
gtatgttcaagatgcaagtgcacacgacagccgagacacacttatatactttcaatgaaa
atatcggatgacacgggacatctatgggctactgcatcaagtatcgttggtgacgaaata
atgaacggaataccagctgctgaagtgttagcgttagctgggaataatgatataaatgta
gatggaaaaaatttcatgaatatattcgaagaagcacgactaacggagtatatcttcaaa
ataaaggtttacaccgaaacgtacatggatgaacccagaatcaaatatcgcgtcactaaa
gctataaaattgagaagatgtttagacacagtcatcaaatgtctaataaaagaaattgat
ggaatgatgttgtga
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